Index isn't building with all vocabularies

OHDSI / Usagi

Usagi is an application to help create mappings between coding systems and the Vocabulary standard concepts.

http://ohdsi.github.io/Usagi/

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Index isn't building with all vocabularies #135

Closed andrewDavisSensyne closed 3 years ago

andrewDavisSensyne commented 3 years ago

I am trying to use the most recent version of usagi but when I index the vocabularies from Athena I get an incomplete list. I am working with ICD10-CM values but the only ICD10 values that show up on usagi are ICD10-PCS. Is this an issue with the csv files that are downloaded from Athena having their delimiter being tabs instead of commas?

MaximMoinat commented 3 years ago

Usagi only makes an index for standard concepts. For an overview which source vocabularies are used as standard, please see Table 5.2 in the Book of OHDSI.