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OHDSI / Vocabulary-v5.0

Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.
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New COVID LOINC Codes #321

Closed kmkostka closed 4 years ago

kmkostka commented 4 years ago

These COVID LOINC codes are being used by the N3C Phenotype but are not available in ATHENA.

LOINC Code Name Provenance
95125-1 SARS-CoV-2 RNA, serum or plasma https://loinc.org/sars-coronavirus-2/
95209-3 SARS-CoV-2 RNA, respiratory specimen https://loinc.org/sars-coronavirus-2/
95406-5 SARS-CoV-2 RNA, nose https://loinc.org/sars-coronavirus-2/
95409-9 SARS-CoV-2 N gene, nose https://loinc.org/sars-coronavirus-2/
95410-7 SARS-CoV-2 neutralizing antibody, serum https://loinc.org/sars-coronavirus-2/
95411-5 SARS-CoV-2 neutralizing antibody, serum https://loinc.org/sars-coronavirus-2/

Can you notify when these are released? We will need to cascade this into our phenotype concept set (community version is stored: http://atlas-covid19.ohdsi.org/#/cohortdefinition/1015).

Alexdavv commented 4 years ago

Hi, @kmkostka It was published in Athena within the recent release.