search

OHNLP / MedTagger

MedTagger is a light weight clinical NLP system built upon Apache UIMA.
Apache License 2.0
61 stars 19 forks source link

can't find org.ohnlp.medtagger.fit.Main #22

Open mingust opened 1 month ago

mingust commented 1 month ago

Describe the bug I am not sure if this is a bug or not configure properly it said: Error: Could not find or load main class org.ohnlp.medtagger.fit.Main

Desktop (please complete the following information):

Additional context Add any other context about the problem here.

mingust commented 4 weeks ago

Oh, that’s from a command in run.bat file.

qqndrew commented 4 weeks ago

What is your execution pathway? Are you launching this through OHNLPTK/Backbone or are you running this directly? Are you downloading the compiled release or are you running this from source?

mingust commented 4 weeks ago

Hi Andrew,

Oh...thanks replying.

I followed the instructions and downloaded the MedTagger-1.0.72 zip After I unzip The runmedtaggerwin.bat is under MedTagger-1.0.72\src\main\resources directory so I tried to run it there (since the bat file has put there)

I think after the unzip, that should be the source files and I am running from source.

One major disappointment is I can't find the covid19 directly for the rule files.

Thanks.

From: Andrew @.> Sent: Friday, August 16, 2024 8:37 AM To: OHNLP/MedTagger @.> Cc: Ming Lo @.>; Author @.> Subject: Re: [OHNLP/MedTagger] can't find org.ohnlp.medtagger.fit.Main (Issue #22)

What is your execution pathway? Are you launching this through OHNLPTK/Backbone or are you running this directly? Are you downloading the compiled release or are you running this from source?

— Reply to this email directly, view it on GitHubhttps://github.com/OHNLP/MedTagger/issues/22#issuecomment-2292513821, or unsubscribehttps://github.com/notifications/unsubscribe-auth/ATOFQAKIB2M2VPLB42TSTEDZRVCTNAVCNFSM6AAAAABMPXNFISVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDEOJSGUYTGOBSGE. You are receiving this because you authored the thread.Message ID: @.***>

qqndrew commented 4 weeks ago

Yeah you downloaded the source code, not the compiled program. You will need to compile yourself via maven or download the release binaries from MedTagger.zip at https://github.com/OHNLP/MedTagger/releases/tag/v1.0.72

The COVID-19 project was consolidated to the pasc project, which is a union of both covid-19 signs/symptoms and signs/symptoms associated with long COVID/post-acute sequelae of COVID-19 (PASC)