I installed confindr via conda and face the error below.
Any suggestions are very welcome. THANKS!
Operating system: Ubuntu 22.04.3 LTS
confindr -h
Traceback (most recent call last):
File "/usr/local/tools/miniconda/envs/confindr/bin/confindr", line 7, in
from confindr_src.confindr import main
File "/usr/local/tools/miniconda/envs/confindr/lib/python3.5/site-packages/confindr_src/confindr.py", line 2, in
from confindr_src.methods import check_acceptable_xmx, check_for_databases_and_download, check_valid_base_fraction, \
File "/usr/local/tools/miniconda/envs/confindr/lib/python3.5/site-packages/confindr_src/methods.py", line 10, in
import numpy as np
File "/usr/local/tools/miniconda/envs/confindr/lib/python3.5/site-packages/numpy/init.py", line 142, in
from . import add_newdocs
File "/usr/local/tools/miniconda/envs/confindr/lib/python3.5/site-packages/numpy/add_newdocs.py", line 13, in
from numpy.lib import add_newdoc
File "/usr/local/tools/miniconda/envs/confindr/lib/python3.5/site-packages/numpy/lib/init.py", line 8, in
from .type_check import *
File "/usr/local/tools/miniconda/envs/confindr/lib/python3.5/site-packages/numpy/lib/type_check.py", line 11, in
import numpy.core.numeric as _nx
File "/usr/local/tools/miniconda/envs/confindr/lib/python3.5/site-packages/numpy/core/init.py", line 14, in
from . import multiarray
ImportError: libgfortran.so.3: cannot open shared object file: No such file or directory
Hi there,
I installed confindr via conda and face the error below.
Any suggestions are very welcome. THANKS!
Operating system: Ubuntu 22.04.3 LTS
confindr -h Traceback (most recent call last): File "/usr/local/tools/miniconda/envs/confindr/bin/confindr", line 7, in
from confindr_src.confindr import main
File "/usr/local/tools/miniconda/envs/confindr/lib/python3.5/site-packages/confindr_src/confindr.py", line 2, in
from confindr_src.methods import check_acceptable_xmx, check_for_databases_and_download, check_valid_base_fraction, \
File "/usr/local/tools/miniconda/envs/confindr/lib/python3.5/site-packages/confindr_src/methods.py", line 10, in
import numpy as np
File "/usr/local/tools/miniconda/envs/confindr/lib/python3.5/site-packages/numpy/init.py", line 142, in
from . import add_newdocs
File "/usr/local/tools/miniconda/envs/confindr/lib/python3.5/site-packages/numpy/add_newdocs.py", line 13, in
from numpy.lib import add_newdoc
File "/usr/local/tools/miniconda/envs/confindr/lib/python3.5/site-packages/numpy/lib/init.py", line 8, in
from .type_check import *
File "/usr/local/tools/miniconda/envs/confindr/lib/python3.5/site-packages/numpy/lib/type_check.py", line 11, in
import numpy.core.numeric as _nx
File "/usr/local/tools/miniconda/envs/confindr/lib/python3.5/site-packages/numpy/core/init.py", line 14, in
from . import multiarray
ImportError: libgfortran.so.3: cannot open shared object file: No such file or directory