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OSC / phylogatr-web

The web app for the Phylogatr Project - https://phylogatr.org/
https://phylogatr.org/
MIT License
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rework alignments #55

Closed johrstrom closed 2 years ago

johrstrom commented 2 years ago

This changes the alignments algorithm a bit to use parallel. The main sbatch file also calls this task favoring it instead of pcp.

This rake task does not use the alignment cache, so that bit has been removed from submit_pipeline.sh. It also is very stable so there's no need for that comment anymore. (I guess using pcp was the cause of the instability?).