Open shastara opened 2 years ago
There seems to be a bug with how long the filename is. This is a bug.
Gem::Package::TooLongFileName: File "phylogatr-results/Bacillariophyceae/Bacillariales/Bacillariaceae/Pseudo-nitzschia-calliantha/Pseudo-nitzschia-calliantha-RIBULOSE-1
,5-BISPHOSPHATE-CARBOXYLASE-OXYGENASE-LARGE-SUBUNIT-(RBCL)-GENE.fa" has a too long name (should be 100 or less)
/app/app/models/search_results.rb:159:in `block (4 levels) in write_tar'
/app/app/models/search_results.rb:157:in `each'
/app/app/models/search_results.rb:157:in `block (3 levels) in write_tar'
/usr/share/gems/gems/activerecord-5.0.6/lib/active_record/relation/delegation.rb:38:in `each'
/usr/share/gems/gems/activerecord-5.0.6/lib/active_record/relation/delegation.rb:38:in `each'
/app/app/models/search_results.rb:156:in `each_with_index'
I'm unable to quickly find the search query you're using to pull this. Do you know the search query I can use to replicate this?
Search Results All
Job: 19449517 has status: completed 82922 species found for search 2.14 GB estimated uncompressed package size, excluding metadata Wrote fasta files for 8292/82922 species 4% Job completed but results not yet available. Either the NFS sync has not completed yet, or the job that should have produced your results failed. To help debug, debug information is below this warning. Showing contents of /fs/scratch/PAS1604/results/owens-quick/19449517.out:
https://phylogatr.osc.edu/searches/19449517?results_format=tgz