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OSOceanAcoustics / echopype-examples

Echopype example notebooks
https://echopype-examples.readthedocs.io/
Apache License 2.0
9 stars 6 forks source link

warnings re dtype in Pacific Hake example #39

Closed eeholmes closed 3 months ago

eeholmes commented 6 months ago

This doesn't stop the example running but this warning appears for every file. echopype 0.8.1 . Example failed (for me) with vrs 0.8.3

/srv/conda/envs/notebook/lib/python3.10/site-packages/echopype/utils/coding.py:87: UserWarning: Times can't be serialized faithfully to int64 with requested units 'seconds since 1900-01-01T00:00:00+00:00'. Resolution of 'microseconds' needed. Serializing times to floating point instead. Set encoding['dtype'] to integer dtype to serialize to int64. Set encoding['dtype'] to floating point dtype to silence this warning.

Output from conda list

# Name                    Version                   Build  Channel
_libgcc_mutex             0.1                 conda_forge    conda-forge
_openmp_mutex             4.5                       2_gnu    conda-forge
accessible-pygments       0.0.4              pyhd8ed1ab_0    conda-forge
affine                    2.4.0              pyhd8ed1ab_0    conda-forge
aiobotocore               2.9.0              pyhd8ed1ab_0    conda-forge
aiohttp                   3.9.1           py310h2372a71_0    conda-forge
aioitertools              0.11.0             pyhd8ed1ab_0    conda-forge
aiosignal                 1.3.1              pyhd8ed1ab_0    conda-forge
alabaster                 0.7.16             pyhd8ed1ab_0    conda-forge
alembic                   1.13.1             pyhd8ed1ab_1    conda-forge
alsa-lib                  1.2.10               hd590300_0    conda-forge
annotated-types           0.6.0              pyhd8ed1ab_0    conda-forge
anyio                     4.2.0              pyhd8ed1ab_0    conda-forge
aom                       3.7.1                h59595ed_0    conda-forge
appdirs                   1.4.4              pyh9f0ad1d_0    conda-forge
argon2-cffi               23.1.0             pyhd8ed1ab_0    conda-forge
argon2-cffi-bindings      21.2.0          py310h2372a71_4    conda-forge
arrow                     1.3.0              pyhd8ed1ab_0    conda-forge
asciitree                 0.3.3                      py_2    conda-forge
asttokens                 2.4.1              pyhd8ed1ab_0    conda-forge
async-lru                 2.0.4              pyhd8ed1ab_0    conda-forge
async-timeout             4.0.3              pyhd8ed1ab_0    conda-forge
async_generator           1.10                       py_0    conda-forge
atk-1.0                   2.38.0               hd4edc92_1    conda-forge
attr                      2.5.1                h166bdaf_1    conda-forge
attrs                     23.2.0             pyh71513ae_0    conda-forge
aws-c-auth                0.7.11               h0100c56_0    conda-forge
aws-c-cal                 0.6.9                h5d48c4d_2    conda-forge
aws-c-common              0.9.10               hd590300_0    conda-forge
aws-c-compression         0.2.17               h7f92143_7    conda-forge
aws-c-event-stream        0.4.1                h0bcb0bb_1    conda-forge
aws-c-http                0.8.0                hd268abd_1    conda-forge
aws-c-io                  0.13.36              hb3b01f7_3    conda-forge
aws-c-mqtt                0.10.0               hf5d392a_2    conda-forge
aws-c-s3                  0.4.7                hf8c57b3_3    conda-forge
aws-c-sdkutils            0.1.13               h7f92143_0    conda-forge
aws-checksums             0.1.17               h7f92143_6    conda-forge
aws-crt-cpp               0.26.0               h600aa22_5    conda-forge
aws-sdk-cpp               1.11.210             h405b101_9    conda-forge
awscliv2                  2.1.1              pyhd8ed1ab_1    conda-forge
azure-core-cpp            1.10.3               h91d86a7_0    conda-forge
azure-storage-blobs-cpp   12.10.0              h00ab1b0_0    conda-forge
azure-storage-common-cpp  12.5.0               hb858b4b_2    conda-forge
babel                     2.14.0             pyhd8ed1ab_0    conda-forge
backoff                   2.2.1              pyhd8ed1ab_0    conda-forge
bcrypt                    4.1.2           py310hcb5633a_0    conda-forge
beautifulsoup4            4.12.3             pyha770c72_0    conda-forge
bleach                    6.1.0              pyhd8ed1ab_0    conda-forge
blinker                   1.7.0              pyhd8ed1ab_0    conda-forge
blosc                     1.21.5               h0f2a231_0    conda-forge
bokeh                     3.2.2              pyhd8ed1ab_0    conda-forge
boto3                     1.33.13            pyhd8ed1ab_0    conda-forge
botocore                  1.33.13            pyhd8ed1ab_0    conda-forge
bounded-pool-executor     0.0.3              pyhd8ed1ab_0    conda-forge
bqplot                    0.12.42            pyhd8ed1ab_0    conda-forge
branca                    0.7.0              pyhd8ed1ab_1    conda-forge
brotli                    1.1.0                hd590300_1    conda-forge
brotli-bin                1.1.0                hd590300_1    conda-forge
brotli-python             1.1.0           py310hc6cd4ac_1    conda-forge
brunsli                   0.1                  h9c3ff4c_0    conda-forge
bzip2                     1.0.8                hd590300_5    conda-forge
c-ares                    1.25.0               hd590300_0    conda-forge
c-blosc2                  2.12.0               hb4ffafa_0    conda-forge
ca-certificates           2024.2.2             hbcca054_0    conda-forge
cachecontrol              0.13.1             pyhd8ed1ab_0    conda-forge
cachecontrol-with-filecache 0.13.1             pyhd8ed1ab_0    conda-forge
cached-property           1.5.2                hd8ed1ab_1    conda-forge
cached_property           1.5.2              pyha770c72_1    conda-forge
cachy                     0.3.0              pyhd8ed1ab_1    conda-forge
cairo                     1.18.0               h3faef2a_0    conda-forge
cartopy                   0.22.0          py310hcc13569_1    conda-forge
ceres-solver              2.2.0                h2ea6fbf_1    conda-forge
certifi                   2024.2.2           pyhd8ed1ab_0    conda-forge
certipy                   0.1.3                      py_0    conda-forge
cffi                      1.16.0          py310h2fee648_0    conda-forge
cfitsio                   4.3.1                hbdc6101_0    conda-forge
cftime                    1.6.3           py310h1f7b6fc_0    conda-forge
charls                    2.4.2                h59595ed_0    conda-forge
charset-normalizer        3.3.2              pyhd8ed1ab_0    conda-forge
click                     8.1.7           unix_pyh707e725_0    conda-forge
click-default-group       1.2.4              pyhd8ed1ab_0    conda-forge
click-plugins             1.1.1                      py_0    conda-forge
cligj                     0.7.2              pyhd8ed1ab_1    conda-forge
clikit                    0.6.2              pyhd8ed1ab_2    conda-forge
cloudpickle               3.0.0              pyhd8ed1ab_0    conda-forge
cmocean                   3.1.3              pyhd8ed1ab_0    conda-forge
code-server               4.16.1               h424e19c_0    conda-forge
coiled                    1.3.6              pyhd8ed1ab_0    conda-forge
colorama                  0.4.6              pyhd8ed1ab_0    conda-forge
colorcet                  3.0.1              pyhd8ed1ab_0    conda-forge
coloredlogs               15.0.1             pyhd8ed1ab_3    conda-forge
colorspacious             1.1.2              pyh24bf2e0_0    conda-forge
comm                      0.2.1              pyhd8ed1ab_0    conda-forge
conda-lock                2.5.1              pyhd8ed1ab_0    conda-forge
configobj                 5.0.8              pyhd8ed1ab_0    conda-forge
contourpy                 1.2.0           py310hd41b1e2_0    conda-forge
coverage                  7.4.0           py310h2372a71_0    conda-forge
crashtest                 0.4.1              pyhd8ed1ab_0    conda-forge
cryptography              41.0.7          py310hb8475ec_1    conda-forge
curl                      8.5.0                hca28451_0    conda-forge
curlify                   2.2.1                    pypi_0    pypi
cycler                    0.12.1             pyhd8ed1ab_0    conda-forge
cytoolz                   0.12.2          py310h2372a71_1    conda-forge
dask                      2024.1.0           pyhd8ed1ab_0    conda-forge
dask-core                 2024.1.0           pyhd8ed1ab_0    conda-forge
dask-gateway              2024.1.0           pyh8af1aa0_0    conda-forge
dask-labextension         7.0.0              pyhd8ed1ab_0    conda-forge
dataclasses               0.8                pyhc8e2a94_3    conda-forge
datashader                0.16.0             pyhd8ed1ab_0    conda-forge
dav1d                     1.2.1                hd590300_0    conda-forge
dbus                      1.13.6               h5008d03_3    conda-forge
debugpy                   1.8.0           py310hc6cd4ac_1    conda-forge
decorator                 5.1.1              pyhd8ed1ab_0    conda-forge
defusedxml                0.7.1              pyhd8ed1ab_0    conda-forge
deprecated                1.2.14             pyh1a96a4e_0    conda-forge
distlib                   0.3.8              pyhd8ed1ab_0    conda-forge
distributed               2024.1.0           pyhd8ed1ab_0    conda-forge
docopt                    0.6.2                      py_1    conda-forge
docutils                  0.18.1          py310hff52083_1    conda-forge
draco                     1.5.7                h00ab1b0_0    conda-forge
earthaccess               0.8.2              pyhd8ed1ab_0    conda-forge
echopype                  0.8.1              pyhd8ed1ab_0    conda-forge
eigen                     3.4.0                h00ab1b0_0    conda-forge
ensureconda               1.4.3              pyhd8ed1ab_0    conda-forge
entrypoints               0.4                pyhd8ed1ab_0    conda-forge
esmf                      8.4.2           nompi_h9e768e6_3    conda-forge
exceptiongroup            1.2.0              pyhd8ed1ab_2    conda-forge
executing                 2.0.1              pyhd8ed1ab_0    conda-forge
executor                  23.2               pyhd3deb0d_0    conda-forge
exiv2                     0.27.6               hb9a316c_1    conda-forge
expat                     2.5.0                hcb278e6_1    conda-forge
fabric                    3.2.2              pyhd8ed1ab_0    conda-forge
fasteners                 0.17.3             pyhd8ed1ab_0    conda-forge
filelock                  3.13.1             pyhd8ed1ab_0    conda-forge
fiona                     1.9.5           py310h0a1e91f_3    conda-forge
folium                    0.15.1             pyhd8ed1ab_0    conda-forge
font-ttf-dejavu-sans-mono 2.37                 hab24e00_0    conda-forge
font-ttf-inconsolata      3.000                h77eed37_0    conda-forge
font-ttf-source-code-pro  2.038                h77eed37_0    conda-forge
font-ttf-ubuntu           0.83                 h77eed37_1    conda-forge
fontconfig                2.14.2               h14ed4e7_0    conda-forge
fonts-conda-ecosystem     1                             0    conda-forge
fonts-conda-forge         1                             0    conda-forge
fonttools                 4.47.2          py310h2372a71_0    conda-forge
fqdn                      1.5.1              pyhd8ed1ab_0    conda-forge
freetype                  2.12.1               h267a509_2    conda-forge
freexl                    2.0.0                h743c826_0    conda-forge
fribidi                   1.0.10               h36c2ea0_0    conda-forge
frozenlist                1.4.1           py310h2372a71_0    conda-forge
fsspec                    2023.12.2          pyhca7485f_0    conda-forge
future                    0.18.3             pyhd8ed1ab_0    conda-forge
gdal                      3.8.3           py310haaa150b_0    conda-forge
gdk-pixbuf                2.42.10              h829c605_4    conda-forge
geographiclib             2.0                pyhd8ed1ab_0    conda-forge
geopandas                 0.14.2             pyhd8ed1ab_0    conda-forge
geopandas-base            0.14.2             pyha770c72_0    conda-forge
geopy                     2.4.1              pyhd8ed1ab_1    conda-forge
geos                      3.12.1               h59595ed_0    conda-forge
geotiff                   1.7.1               h6b2125f_15    conda-forge
geoviews                  1.11.0             pyhd8ed1ab_0    conda-forge
geoviews-core             1.11.0             pyha770c72_0    conda-forge
gettext                   0.21.1               h27087fc_0    conda-forge
gflags                    2.2.2             he1b5a44_1004    conda-forge
giflib                    5.2.1                h0b41bf4_3    conda-forge
gilknocker                0.4.1           py310hcb5633a_3    conda-forge
git                       2.43.0          pl5321h7bc287a_0    conda-forge
gitdb                     4.0.11             pyhd8ed1ab_0    conda-forge
gitpython                 3.1.41             pyhd8ed1ab_0    conda-forge
glib                      2.78.3               hfc55251_0    conda-forge
glib-tools                2.78.3               hfc55251_0    conda-forge
glog                      0.6.0                h6f12383_0    conda-forge
gmp                       6.3.0                h59595ed_0    conda-forge
graphite2                 1.3.13            h58526e2_1001    conda-forge
graphviz                  9.0.0                h78e8752_1    conda-forge
greenlet                  3.0.3           py310hc6cd4ac_0    conda-forge
gsl                       2.7                  he838d99_0    conda-forge
gst-plugins-base          1.22.8               h8e1006c_1    conda-forge
gstreamer                 1.22.8               h98fc4e7_1    conda-forge
gtk2                      2.24.33              h7f000aa_3    conda-forge
gts                       0.7.6                h977cf35_4    conda-forge
h11                       0.14.0             pyhd8ed1ab_0    conda-forge
h2                        4.1.0              pyhd8ed1ab_0    conda-forge
h5coro                    0.0.6              pyhd8ed1ab_0    conda-forge
h5grove                   1.3.0              pyhd8ed1ab_0    conda-forge
h5netcdf                  1.3.0              pyhd8ed1ab_0    conda-forge
h5py                      3.10.0          nompi_py310h65828d5_101    conda-forge
harfbuzz                  8.3.0                h3d44ed6_0    conda-forge
harmony-py                0.4.10                   pypi_0    pypi
hdf4                      4.2.15               h2a13503_7    conda-forge
hdf5                      1.14.3          nompi_h4f84152_100    conda-forge
hdf5plugin                4.3.0           py310hf0a3695_0    conda-forge
holoviews                 1.16.2             pyhd8ed1ab_0    conda-forge
hpack                     4.0.0              pyh9f0ad1d_0    conda-forge
html5lib                  1.1                pyh9f0ad1d_0    conda-forge
httpcore                  1.0.2              pyhd8ed1ab_0    conda-forge
httplib2                  0.22.0             pyhd8ed1ab_0    conda-forge
httpx                     0.26.0             pyhd8ed1ab_0    conda-forge
humanfriendly             10.0               pyhd8ed1ab_6    conda-forge
hvplot                    0.9.1              pyhd8ed1ab_0    conda-forge
hyperframe                6.0.1              pyhd8ed1ab_0    conda-forge
icepyx                    1.0.0              pyhd8ed1ab_0    conda-forge
icu                       73.2                 h59595ed_0    conda-forge
idna                      3.6                pyhd8ed1ab_0    conda-forge
imagecodecs               2024.1.1        py310h496a806_0    conda-forge
imageio                   2.33.1             pyh8c1a49c_0    conda-forge
imagesize                 1.4.1              pyhd8ed1ab_0    conda-forge
importlib-metadata        7.0.1              pyha770c72_0    conda-forge
importlib-resources       6.1.1              pyhd8ed1ab_0    conda-forge
importlib_metadata        7.0.1                hd8ed1ab_0    conda-forge
importlib_resources       6.1.1              pyhd8ed1ab_0    conda-forge
intake                    0.7.0              pyhd8ed1ab_0    conda-forge
invoke                    2.2.0              pyhd8ed1ab_0    conda-forge
ipykernel                 6.29.0             pyhd33586a_0    conda-forge
ipyleaflet                0.18.1             pyhd8ed1ab_0    conda-forge
ipympl                    0.9.3              pyhd8ed1ab_0    conda-forge
ipython                   8.20.0             pyh707e725_0    conda-forge
ipython_genutils          0.2.0                      py_1    conda-forge
ipywidgets                8.1.1              pyhd8ed1ab_0    conda-forge
isoduration               20.11.0            pyhd8ed1ab_0    conda-forge
itslive                   0.3.0              pyhd8ed1ab_0    conda-forge
jaraco.classes            3.3.0              pyhd8ed1ab_0    conda-forge
jedi                      0.19.1             pyhd8ed1ab_0    conda-forge
jeepney                   0.8.0              pyhd8ed1ab_0    conda-forge
jinja2                    3.1.3              pyhd8ed1ab_0    conda-forge
jmespath                  1.0.1              pyhd8ed1ab_0    conda-forge
joblib                    1.3.2              pyhd8ed1ab_0    conda-forge
json-c                    0.17                 h7ab15ed_0    conda-forge
json5                     0.9.14             pyhd8ed1ab_0    conda-forge
jsondiff                  2.0.0              pyhd8ed1ab_0    conda-forge
jsonpointer               2.4             py310hff52083_3    conda-forge
jsonschema                4.21.0             pyhd8ed1ab_0    conda-forge
jsonschema-specifications 2023.12.1          pyhd8ed1ab_0    conda-forge
jsonschema-with-format-nongpl 4.21.0             pyhd8ed1ab_0    conda-forge
jupyter-book              0.15.1             pyhd8ed1ab_0    conda-forge
jupyter-cache             0.6.1              pyhd8ed1ab_0    conda-forge
jupyter-desktop-server    0.1.3                    pypi_0    pypi
jupyter-lsp               2.2.2              pyhd8ed1ab_0    conda-forge
jupyter-resource-usage    1.0.1              pyhd8ed1ab_0    conda-forge
jupyter-server-mathjax    0.2.6              pyh5bfe37b_1    conda-forge
jupyter-server-proxy      4.1.0              pyhd8ed1ab_0    conda-forge
jupyter-vscode-proxy      0.5                pyhd8ed1ab_0    conda-forge
jupyter_client            8.6.0              pyhd8ed1ab_0    conda-forge
jupyter_core              5.7.1           py310hff52083_0    conda-forge
jupyter_events            0.9.0              pyhd8ed1ab_0    conda-forge
jupyter_server            2.12.5             pyhd8ed1ab_0    conda-forge
jupyter_server_terminals  0.5.1              pyhd8ed1ab_0    conda-forge
jupyter_telemetry         0.1.0              pyhd8ed1ab_1    conda-forge
jupyterhub-base           4.0.2              pyh31011fe_0    conda-forge
jupyterhub-singleuser     4.0.2              pyh31011fe_0    conda-forge
jupyterlab                4.0.10             pyhd8ed1ab_0    conda-forge
jupyterlab-favorites      3.2.1              pyhd8ed1ab_0    conda-forge
jupyterlab-geojson        3.4.0              pyhd8ed1ab_0    conda-forge
jupyterlab-git            0.50.0             pyhd8ed1ab_0    conda-forge
jupyterlab-h5web          11.1.0             pyhd8ed1ab_0    conda-forge
jupyterlab-myst           2.1.0              pyhd8ed1ab_0    conda-forge
jupyterlab-quarto         0.2.8                    pypi_0    pypi
jupyterlab_pygments       0.3.0              pyhd8ed1ab_0    conda-forge
jupyterlab_server         2.25.2             pyhd8ed1ab_0    conda-forge
jupyterlab_widgets        3.0.9              pyhd8ed1ab_0    conda-forge
jwcrypto                  1.5.0              pyhd8ed1ab_0    conda-forge
jxrlib                    1.1                  hd590300_3    conda-forge
kealib                    1.5.3                h2f55d51_0    conda-forge
kerchunk                  0.2.2              pyhd8ed1ab_0    conda-forge
keyring                   24.3.0          py310hff52083_0    conda-forge
keyutils                  1.6.1                h166bdaf_0    conda-forge
kiwisolver                1.4.5           py310hd41b1e2_1    conda-forge
krb5                      1.21.2               h659d440_0    conda-forge
lame                      3.100             h166bdaf_1003    conda-forge
latexcodec                2.0.1              pyh9f0ad1d_0    conda-forge
laz-perf                  3.4.0                h00ab1b0_0    conda-forge
lazy_loader               0.3                pyhd8ed1ab_0    conda-forge
lcms2                     2.16                 hb7c19ff_0    conda-forge
ld_impl_linux-64          2.40                 h41732ed_0    conda-forge
lerc                      4.0.0                h27087fc_0    conda-forge
libabseil                 20230802.1      cxx17_h59595ed_0    conda-forge
libaec                    1.1.2                h59595ed_1    conda-forge
libarchive                3.7.2                h2aa1ff5_1    conda-forge
libarrow                  14.0.2           h84dd17c_2_cpu    conda-forge
libarrow-acero            14.0.2           h59595ed_2_cpu    conda-forge
libarrow-dataset          14.0.2           h59595ed_2_cpu    conda-forge
libarrow-flight           14.0.2           h120cb0d_2_cpu    conda-forge
libarrow-flight-sql       14.0.2           h61ff412_2_cpu    conda-forge
libarrow-gandiva          14.0.2           hacb8726_2_cpu    conda-forge
libarrow-substrait        14.0.2           h61ff412_2_cpu    conda-forge
libavif16                 1.0.3                hef5bec9_1    conda-forge
libblas                   3.9.0           20_linux64_openblas    conda-forge
libboost-headers          1.84.0               ha770c72_0    conda-forge
libbrotlicommon           1.1.0                hd590300_1    conda-forge
libbrotlidec              1.1.0                hd590300_1    conda-forge
libbrotlienc              1.1.0                hd590300_1    conda-forge
libcap                    2.69                 h0f662aa_0    conda-forge
libcblas                  3.9.0           20_linux64_openblas    conda-forge
libclang                  15.0.7          default_hb11cfb5_4    conda-forge
libclang13                15.0.7          default_ha2b6cf4_4    conda-forge
libcrc32c                 1.1.2                h9c3ff4c_0    conda-forge
libcups                   2.3.3                h4637d8d_4    conda-forge
libcurl                   8.5.0                hca28451_0    conda-forge
libdeflate                1.19                 hd590300_0    conda-forge
libedit                   3.1.20191231         he28a2e2_2    conda-forge
libev                     4.33                 hd590300_2    conda-forge
libevent                  2.1.12               hf998b51_1    conda-forge
libexpat                  2.5.0                hcb278e6_1    conda-forge
libffi                    3.4.2                h7f98852_5    conda-forge
libflac                   1.4.3                h59595ed_0    conda-forge
libgcc-ng                 13.2.0               h807b86a_3    conda-forge
libgcrypt                 1.10.3               hd590300_0    conda-forge
libgd                     2.3.3                h119a65a_9    conda-forge
libgdal                   3.8.3                hcd1fc54_0    conda-forge
libgfortran-ng            13.2.0               h69a702a_3    conda-forge
libgfortran5              13.2.0               ha4646dd_3    conda-forge
libglib                   2.78.3               h783c2da_0    conda-forge
libgomp                   13.2.0               h807b86a_3    conda-forge
libgoogle-cloud           2.12.0               h5206363_4    conda-forge
libgpg-error              1.47                 h71f35ed_0    conda-forge
libgrpc                   1.59.3               hd6c4280_0    conda-forge
libhwloc                  2.9.3           default_h554bfaf_1009    conda-forge
libiconv                  1.17                 hd590300_2    conda-forge
libjpeg-turbo             3.0.0                hd590300_1    conda-forge
libkml                    1.3.0             h01aab08_1018    conda-forge
liblapack                 3.9.0           20_linux64_openblas    conda-forge
libllvm14                 14.0.6               hcd5def8_4    conda-forge
libllvm15                 15.0.7               hb3ce162_4    conda-forge
libnetcdf                 4.9.2           nompi_h9612171_113    conda-forge
libnghttp2                1.58.0               h47da74e_1    conda-forge
libnl                     3.9.0                hd590300_0    conda-forge
libnsl                    2.0.1                hd590300_0    conda-forge
libnuma                   2.0.16               h0b41bf4_1    conda-forge
libogg                    1.3.4                h7f98852_1    conda-forge
libopenblas               0.3.25          pthreads_h413a1c8_0    conda-forge
libopus                   1.3.1                h7f98852_1    conda-forge
libparquet                14.0.2           h352af49_2_cpu    conda-forge
libpng                    1.6.39               h753d276_0    conda-forge
libpq                     16.1                 h33b98f1_7    conda-forge
libprotobuf               4.24.4               hf27288f_0    conda-forge
libre2-11                 2023.06.02           h7a70373_0    conda-forge
librsvg                   2.56.3               he3f83f7_1    conda-forge
librttopo                 1.1.0               h8917695_15    conda-forge
libsecret                 0.18.8               h329b89f_2    conda-forge
libsndfile                1.2.2                hc60ed4a_1    conda-forge
libsodium                 1.0.18               h36c2ea0_1    conda-forge
libspatialindex           1.9.3                h9c3ff4c_4    conda-forge
libspatialite             5.1.0                h7bd4643_4    conda-forge
libsqlite                 3.44.2               h2797004_0    conda-forge
libssh2                   1.11.0               h0841786_0    conda-forge
libstdcxx-ng              13.2.0               h7e041cc_3    conda-forge
libsystemd0               255                  h3516f8a_0    conda-forge
libthrift                 0.19.0               hb90f79a_1    conda-forge
libtiff                   4.6.0                ha9c0a0a_2    conda-forge
libudunits2               2.2.28               h40f5838_3    conda-forge
libutf8proc               2.8.0                h166bdaf_0    conda-forge
libuuid                   2.38.1               h0b41bf4_0    conda-forge
libuv                     1.46.0               hd590300_0    conda-forge
libvorbis                 1.3.7                h9c3ff4c_0    conda-forge
libwebp                   1.3.2                h658648e_1    conda-forge
libwebp-base              1.3.2                hd590300_0    conda-forge
libxcb                    1.15                 h0b41bf4_0    conda-forge
libxcrypt                 4.4.36               hd590300_1    conda-forge
libxkbcommon              1.6.0                hd429924_1    conda-forge
libxml2                   2.12.4               h232c23b_1    conda-forge
libxslt                   1.1.39               h76b75d6_0    conda-forge
libzip                    1.10.1               h2629f0a_3    conda-forge
libzlib                   1.2.13               hd590300_5    conda-forge
libzopfli                 1.0.3                h9c3ff4c_0    conda-forge
linkify-it-py             2.0.2              pyhd8ed1ab_0    conda-forge
llvmlite                  0.41.1          py310h1b8f574_0    conda-forge
locket                    1.0.0              pyhd8ed1ab_0    conda-forge
lxml                      5.1.0           py310hcfd0673_0    conda-forge
lz4                       4.3.3           py310h350c4a5_0    conda-forge
lz4-c                     1.9.4                hcb278e6_0    conda-forge
lzo                       2.10              h516909a_1000    conda-forge
mako                      1.3.0              pyhd8ed1ab_0    conda-forge
mapclassify               2.6.1              pyhd8ed1ab_0    conda-forge
markdown                  3.5.2              pyhd8ed1ab_0    conda-forge
markdown-it-py            2.2.0              pyhd8ed1ab_0    conda-forge
markupsafe                2.1.3           py310h2372a71_1    conda-forge
matplotlib-base           3.8.2           py310h62c0568_0    conda-forge
matplotlib-inline         0.1.6              pyhd8ed1ab_0    conda-forge
mdit-py-plugins           0.4.0              pyhd8ed1ab_0    conda-forge
mdurl                     0.1.2              pyhd8ed1ab_0    conda-forge
metis                     5.1.1                h59595ed_2    conda-forge
minizip                   4.0.4                h0ab5242_0    conda-forge
mistune                   3.0.2              pyhd8ed1ab_0    conda-forge
mock                      5.1.0              pyhd8ed1ab_0    conda-forge
more-itertools            8.13.0             pyhd8ed1ab_0    conda-forge
mpfr                      4.2.1                h9458935_0    conda-forge
mpg123                    1.32.4               h59595ed_0    conda-forge
msgpack-python            1.0.7           py310hd41b1e2_0    conda-forge
multidict                 6.0.4           py310h2372a71_1    conda-forge
multimethod               1.9.1              pyhd8ed1ab_0    conda-forge
multipledispatch          0.6.0                      py_0    conda-forge
munkres                   1.1.4              pyh9f0ad1d_0    conda-forge
mypy_extensions           1.0.0              pyha770c72_0    conda-forge
mysql-common              8.0.33               hf1915f5_6    conda-forge
mysql-libs                8.0.33               hca2cd23_6    conda-forge
myst-nb                   0.17.2             pyhd8ed1ab_0    conda-forge
myst-parser               0.18.1             pyhd8ed1ab_0    conda-forge
nbclient                  0.7.4              pyhd8ed1ab_0    conda-forge
nbconvert-core            7.14.2             pyhd8ed1ab_0    conda-forge
nbdime                    4.0.1              pyhd8ed1ab_0    conda-forge
nbformat                  5.9.2              pyhd8ed1ab_0    conda-forge
nbgitpuller               1.2.0              pyhd8ed1ab_0    conda-forge
nco                       5.1.9                h00920e0_0    conda-forge
ncurses                   6.4                  h59595ed_2    conda-forge
nest-asyncio              1.5.9              pyhd8ed1ab_0    conda-forge
netcdf-fortran            4.6.1           nompi_hacb5139_103    conda-forge
netcdf4                   1.6.5           nompi_py310hba70d50_100    conda-forge
networkx                  3.2.1              pyhd8ed1ab_0    conda-forge
nitro                     2.7.dev8             h59595ed_0    conda-forge
nodejs                    16.20.2              h1990674_2    conda-forge
nose2                     0.9.2                      py_0    conda-forge
notebook                  7.0.6              pyhd8ed1ab_0    conda-forge
notebook-shim             0.2.3              pyhd8ed1ab_0    conda-forge
nspr                      4.35                 h27087fc_0    conda-forge
nss                       3.96                 h1d7d5a4_0    conda-forge
numba                     0.58.1          py310h7dc5dd1_0    conda-forge
numcodecs                 0.11.0          py310heca2aa9_1    conda-forge
numpy                     1.26.3          py310hb13e2d6_0    conda-forge
oauthlib                  3.2.2              pyhd8ed1ab_0    conda-forge
ocl-icd                   2.3.1                h7f98852_0    conda-forge
ocl-icd-system            1.0.0                         1    conda-forge
openjpeg                  2.5.0                h488ebb8_3    conda-forge
openssl                   3.2.1                hd590300_1    conda-forge
orc                       1.9.2                h4b38347_0    conda-forge
orjson                    3.9.10          py310h1e2579a_0    conda-forge
overrides                 7.4.0              pyhd8ed1ab_0    conda-forge
owslib                    0.29.3             pyhd8ed1ab_0    conda-forge
packaging                 23.2               pyhd8ed1ab_0    conda-forge
pamela                    1.1.0              pyh1a96a4e_0    conda-forge
pandas                    1.5.1           py310h769672d_1    conda-forge
pandocfilters             1.5.0              pyhd8ed1ab_0    conda-forge
panel                     1.2.3              pyhd8ed1ab_0    conda-forge
pango                     1.50.14              ha41ecd1_2    conda-forge
param                     1.13.0             pyh1a96a4e_0    conda-forge
paramiko                  3.4.0              pyhd8ed1ab_0    conda-forge
parso                     0.8.3              pyhd8ed1ab_0    conda-forge
partd                     1.4.1              pyhd8ed1ab_0    conda-forge
pastel                    0.2.1              pyhd8ed1ab_0    conda-forge
patsy                     0.5.6              pyhd8ed1ab_0    conda-forge
pcre2                     10.42                hcad00b1_0    conda-forge
pdal                      2.6.2                h5958a67_2    conda-forge
perl                      5.32.1          7_hd590300_perl5    conda-forge
pexpect                   4.8.0              pyh1a96a4e_2    conda-forge
pickleshare               0.7.5                   py_1003    conda-forge
pillow                    10.2.0          py310h01dd4db_0    conda-forge
pip                       23.3.2             pyhd8ed1ab_0    conda-forge
pip-requirements-parser   32.0.1             pyhd8ed1ab_0    conda-forge
pixman                    0.43.0               h59595ed_0    conda-forge
pkginfo                   1.9.6              pyhd8ed1ab_0    conda-forge
pkgutil-resolve-name      1.3.10             pyhd8ed1ab_1    conda-forge
platformdirs              4.1.0              pyhd8ed1ab_0    conda-forge
plotext                   5.2.8              pyhd8ed1ab_0    conda-forge
plotly                    5.18.0             pyhd8ed1ab_0    conda-forge
ply                       3.11                       py_1    conda-forge
pockets                   0.9.1                    pypi_0    pypi
pooch                     1.8.0              pyhd8ed1ab_0    conda-forge
poppler                   23.12.0              h590f24d_0    conda-forge
poppler-data              0.4.12               hd8ed1ab_0    conda-forge
postgresql                16.1                 h7387d8b_7    conda-forge
pqdm                      0.2.0              pyhd8ed1ab_0    conda-forge
progressbar2              3.55.0                   pypi_0    pypi
proj                      9.3.1                h1d62c97_0    conda-forge
prometheus_client         0.19.0             pyhd8ed1ab_0    conda-forge
prompt-toolkit            3.0.42             pyha770c72_0    conda-forge
property-manager          3.0                        py_0    conda-forge
psutil                    5.9.7           py310h2372a71_0    conda-forge
psycopg2                  2.9.9           py310h275853b_0    conda-forge
pthread-stubs             0.4               h36c2ea0_1001    conda-forge
ptyprocess                0.7.0              pyhd3deb0d_0    conda-forge
pulseaudio-client         16.1                 hb77b528_5    conda-forge
pure_eval                 0.2.2              pyhd8ed1ab_0    conda-forge
pyarrow                   14.0.2          py310hf9e7431_2_cpu    conda-forge
pyarrow-hotfix            0.6                pyhd8ed1ab_0    conda-forge
pybtex                    0.24.0             pyhd8ed1ab_2    conda-forge
pybtex-docutils           1.0.3           py310hff52083_1    conda-forge
pycparser                 2.21               pyhd8ed1ab_0    conda-forge
pyct                      0.5.0              pyhd8ed1ab_0    conda-forge
pydantic                  2.5.3              pyhd8ed1ab_0    conda-forge
pydantic-core             2.14.6          py310hcb5633a_1    conda-forge
pydap                     3.4.0              pyhd8ed1ab_0    conda-forge
pydata-sphinx-theme       0.15.1             pyhd8ed1ab_0    conda-forge
pygments                  2.17.2             pyhd8ed1ab_0    conda-forge
pyjwt                     2.8.0              pyhd8ed1ab_0    conda-forge
pykdtree                  1.3.10          py310h1f7b6fc_0    conda-forge
pylev                     1.4.0              pyhd8ed1ab_0    conda-forge
pynacl                    1.5.0           py310h2372a71_3    conda-forge
pynco                     1.1.0              pyhd8ed1ab_1    conda-forge
pynmea2                   1.19.0             pyhd8ed1ab_0    conda-forge
pyopencl                  2023.1.4        py310hcb52e73_0    conda-forge
pyopenssl                 23.3.0             pyhd8ed1ab_0    conda-forge
pyparsing                 3.1.1              pyhd8ed1ab_0    conda-forge
pyproj                    3.6.1           py310hd5c30f3_5    conda-forge
pyqt                      5.15.9          py310h04931ad_5    conda-forge
pyqt5-sip                 12.12.2         py310hc6cd4ac_5    conda-forge
pyqtwebkit                5.15.9          py310h37eb29e_2    conda-forge
pyresample                1.27.1          py310hcc13569_2    conda-forge
pyshp                     2.3.1              pyhd8ed1ab_0    conda-forge
pysocks                   1.7.1              pyha2e5f31_6    conda-forge
pystac                    1.9.0              pyhd8ed1ab_0    conda-forge
pystac-client             0.7.5              pyhd8ed1ab_0    conda-forge
python                    3.10.13         hd12c33a_1_cpython    conda-forge
python-cmr                0.9.0              pyhd8ed1ab_0    conda-forge
python-dateutil           2.8.2              pyhd8ed1ab_0    conda-forge
python-dotenv             0.20.0                   pypi_0    pypi
python-fastjsonschema     2.19.1             pyhd8ed1ab_0    conda-forge
python-graphviz           0.20.1                   pypi_0    pypi
python-json-logger        2.0.7              pyhd8ed1ab_0    conda-forge
python-utils              3.8.1                    pypi_0    pypi
python_abi                3.10                    4_cp310    conda-forge
pytools                   2023.1.1           pyhd8ed1ab_0    conda-forge
pytz                      2023.3.post1       pyhd8ed1ab_0    conda-forge
pyviz_comms               3.0.0              pyhd8ed1ab_0    conda-forge
pywavelets                1.4.1           py310h1f7b6fc_1    conda-forge
pyyaml                    6.0.1           py310h2372a71_1    conda-forge
pyzmq                     25.1.2          py310h795f18f_0    conda-forge
qca                       2.3.8                h4a6f7a0_0    conda-forge
qgis                      3.34.2          py310h00c3aac_1    conda-forge
qjson                     0.9.0             h0c700ba_1009    conda-forge
qscintilla2               2.14.1          py310h37eb29e_0    conda-forge
qt-main                   5.15.8              h450f30e_18    conda-forge
qtkeychain                0.14.2               hbc31b07_0    conda-forge
qtwebkit                  5.212               h60108c6_16    conda-forge
qwt                       6.2.0                h1a478b3_6    conda-forge
rasterio                  1.3.9           py310hedc89e0_2    conda-forge
rasterstats               0.19.0             pyhd8ed1ab_0    conda-forge
rav1e                     0.6.6                he8a937b_2    conda-forge
rdma-core                 49.0                 hd3aeb46_2    conda-forge
re2                       2023.06.02           h2873b5e_0    conda-forge
readline                  8.2                  h8228510_1    conda-forge
rechunker                 0.5.2              pyhd8ed1ab_1    conda-forge
redis-py                  5.0.1              pyhd8ed1ab_0    conda-forge
referencing               0.32.1             pyhd8ed1ab_0    conda-forge
requests                  2.31.0             pyhd8ed1ab_0    conda-forge
rfc3339-validator         0.1.4              pyhd8ed1ab_0    conda-forge
rfc3986-validator         0.1.1              pyh9f0ad1d_0    conda-forge
rich                      13.7.0             pyhd8ed1ab_0    conda-forge
rich-click                1.7.3              pyhd8ed1ab_0    conda-forge
rioxarray                 0.15.0             pyhd8ed1ab_0    conda-forge
rpds-py                   0.17.1          py310hcb5633a_0    conda-forge
rtree                     1.1.0           py310hbdcdc62_0    conda-forge
ruamel.yaml               0.18.5          py310h2372a71_0    conda-forge
ruamel.yaml.clib          0.2.7           py310h2372a71_2    conda-forge
s2n                       1.4.1                h06160fa_0    conda-forge
s3fs                      2023.12.2          pyhd8ed1ab_0    conda-forge
s3transfer                0.8.2              pyhd8ed1ab_0    conda-forge
scikit-image              0.22.0          py310hcc13569_2    conda-forge
scikit-learn              1.3.2           py310h1fdf081_2    conda-forge
scipy                     1.11.4          py310hb13e2d6_0    conda-forge
seaborn                   0.13.1               hd8ed1ab_0    conda-forge
seaborn-base              0.13.1             pyhd8ed1ab_0    conda-forge
secretstorage             3.3.3           py310hff52083_2    conda-forge
send2trash                1.8.2              pyh41d4057_0    conda-forge
setuptools                69.0.3             pyhd8ed1ab_0    conda-forge
setuptools-scm            8.0.4              pyhd8ed1ab_0    conda-forge
setuptools_scm            8.0.4                hd8ed1ab_0    conda-forge
shapely                   2.0.2           py310hc3e127f_1    conda-forge
simpervisor               1.0.0              pyhd8ed1ab_0    conda-forge
simplejson                3.19.2          py310h2372a71_0    conda-forge
sip                       6.7.12          py310hc6cd4ac_0    conda-forge
six                       1.16.0             pyh6c4a22f_0    conda-forge
sliderule                 4.1.0              pyhd8ed1ab_0    conda-forge
smmap                     5.0.0              pyhd8ed1ab_0    conda-forge
snappy                    1.1.10               h9fff704_0    conda-forge
sniffio                   1.3.0              pyhd8ed1ab_0    conda-forge
snowballstemmer           2.2.0              pyhd8ed1ab_0    conda-forge
snuggs                    1.4.7                      py_0    conda-forge
sortedcontainers          2.4.0              pyhd8ed1ab_0    conda-forge
soupsieve                 2.5                pyhd8ed1ab_1    conda-forge
spectral                  0.23.1             pyh1a96a4e_0    conda-forge
sphinx                    5.0.2              pyh6c4a22f_0    conda-forge
sphinx-book-theme         1.0.1              pyhd8ed1ab_0    conda-forge
sphinx-comments           0.0.3              pyh9f0ad1d_0    conda-forge
sphinx-copybutton         0.5.2              pyhd8ed1ab_0    conda-forge
sphinx-design             0.3.0              pyhd8ed1ab_0    conda-forge
sphinx-external-toc       0.3.1              pyhd8ed1ab_1    conda-forge
sphinx-jupyterbook-latex  0.5.2              pyhd8ed1ab_0    conda-forge
sphinx-multitoc-numbering 0.1.3              pyhd8ed1ab_0    conda-forge
sphinx-thebe              0.2.1              pyhd8ed1ab_0    conda-forge
sphinx-togglebutton       0.3.2              pyhd8ed1ab_0    conda-forge
sphinxcontrib-applehelp   1.0.8              pyhd8ed1ab_0    conda-forge
sphinxcontrib-bibtex      2.5.0              pyhd8ed1ab_0    conda-forge
sphinxcontrib-devhelp     1.0.6              pyhd8ed1ab_0    conda-forge
sphinxcontrib-htmlhelp    2.0.5              pyhd8ed1ab_0    conda-forge
sphinxcontrib-jsmath      1.0.1              pyhd8ed1ab_0    conda-forge
sphinxcontrib-napoleon    0.7                      pypi_0    pypi
sphinxcontrib-qthelp      1.0.7              pyhd8ed1ab_0    conda-forge
sphinxcontrib-serializinghtml 1.1.10             pyhd8ed1ab_0    conda-forge
sqlalchemy                2.0.25          py310h2372a71_0    conda-forge
sqlite                    3.44.2               h2c6b66d_0    conda-forge
stack_data                0.6.2              pyhd8ed1ab_0    conda-forge
statsmodels               0.14.1          py310h1f7b6fc_0    conda-forge
suitesparse               5.10.1               h3ec001c_2    conda-forge
svt-av1                   1.8.0                h59595ed_0    conda-forge
tabulate                  0.9.0              pyhd8ed1ab_1    conda-forge
tbb                       2021.11.0            h00ab1b0_0    conda-forge
tblib                     3.0.0              pyhd8ed1ab_0    conda-forge
tempest-remap             2.2.0                h13910d2_3    conda-forge
tenacity                  8.2.3              pyhd8ed1ab_0    conda-forge
terminado                 0.18.0             pyh0d859eb_0    conda-forge
threadpoolctl             3.2.0              pyha21a80b_0    conda-forge
tifffile                  2023.12.9          pyhd8ed1ab_0    conda-forge
tiledb                    2.19.0               hc1131af_0    conda-forge
tinycss2                  1.2.1              pyhd8ed1ab_0    conda-forge
tinynetrc                 1.3.1              pyhd8ed1ab_0    conda-forge
tk                        8.6.13          noxft_h4845f30_101    conda-forge
toml                      0.10.2             pyhd8ed1ab_0    conda-forge
tomli                     2.0.1              pyhd8ed1ab_0    conda-forge
tomlkit                   0.12.3             pyha770c72_0    conda-forge
toolz                     0.12.0             pyhd8ed1ab_0    conda-forge
tornado                   6.3.3           py310h2372a71_1    conda-forge
tqdm                      4.66.1             pyhd8ed1ab_0    conda-forge
traitlets                 5.14.1             pyhd8ed1ab_0    conda-forge
traittypes                0.2.1              pyh9f0ad1d_2    conda-forge
types-python-dateutil     2.8.19.20240106    pyhd8ed1ab_0    conda-forge
typing-extensions         4.9.0                hd8ed1ab_0    conda-forge
typing_extensions         4.9.0              pyha770c72_0    conda-forge
typing_utils              0.1.0              pyhd8ed1ab_0    conda-forge
tzcode                    2023d                h3f72095_0    conda-forge
tzdata                    2023d                h0c530f3_0    conda-forge
uc-micro-py               1.0.2              pyhd8ed1ab_0    conda-forge
ucx                       1.15.0               h75e419f_2    conda-forge
ujson                     5.9.0           py310hc6cd4ac_0    conda-forge
unicodedata2              15.1.0          py310h2372a71_0    conda-forge
uri-template              1.3.0              pyhd8ed1ab_0    conda-forge
uriparser                 0.9.7                hcb278e6_1    conda-forge
urllib3                   1.26.18            pyhd8ed1ab_0    conda-forge
verboselogs               1.7                        py_0    conda-forge
virtualenv                20.25.0            pyhd8ed1ab_0    conda-forge
wcwidth                   0.2.13             pyhd8ed1ab_0    conda-forge
webcolors                 1.13               pyhd8ed1ab_0    conda-forge
webencodings              0.5.1              pyhd8ed1ab_2    conda-forge
webob                     1.8.7              pyhd8ed1ab_0    conda-forge
websocket-client          1.7.0              pyhd8ed1ab_0    conda-forge
websockify                0.11.0          py310h2372a71_2    conda-forge
wheel                     0.42.0             pyhd8ed1ab_0    conda-forge
widgetsnbextension        4.0.9              pyhd8ed1ab_0    conda-forge
wrapt                     1.16.0          py310h2372a71_0    conda-forge
xarray                    2023.12.0          pyhd8ed1ab_0    conda-forge
xarray-datatree           0.0.6              pyhd8ed1ab_0    conda-forge
xcb-util                  0.4.0                hd590300_1    conda-forge
xcb-util-image            0.4.0                h8ee46fc_1    conda-forge
xcb-util-keysyms          0.4.0                h8ee46fc_1    conda-forge
xcb-util-renderutil       0.3.9                hd590300_1    conda-forge
xcb-util-wm               0.4.1                h8ee46fc_1    conda-forge
xerces-c                  3.2.5                hac6953d_0    conda-forge
xkeyboard-config          2.40                 hd590300_0    conda-forge
xorg-kbproto              1.0.7             h7f98852_1002    conda-forge
xorg-libice               1.1.1                hd590300_0    conda-forge
xorg-libsm                1.2.4                h7391055_0    conda-forge
xorg-libx11               1.8.7                h8ee46fc_0    conda-forge
xorg-libxau               1.0.11               hd590300_0    conda-forge
xorg-libxdmcp             1.1.3                h7f98852_0    conda-forge
xorg-libxext              1.3.4                h0b41bf4_2    conda-forge
xorg-libxrender           0.9.11               hd590300_0    conda-forge
xorg-renderproto          0.11.1            h7f98852_1002    conda-forge
xorg-xextproto            7.3.0             h0b41bf4_1003    conda-forge
xorg-xf86vidmodeproto     2.3.1             h7f98852_1002    conda-forge
xorg-xproto               7.0.31            h7f98852_1007    conda-forge
xq                        0.0.4                    pypi_0    pypi
xyzservices               2023.10.1          pyhd8ed1ab_0    conda-forge
xz                        5.2.6                h166bdaf_0    conda-forge
yaml                      0.2.5                h7f98852_2    conda-forge
yarl                      1.9.4           py310h2372a71_0    conda-forge
zarr                      2.16.1             pyhd8ed1ab_0    conda-forge
zeromq                    4.3.5                h59595ed_0    conda-forge
zfp                       1.0.1                h59595ed_0    conda-forge
zict                      3.0.0              pyhd8ed1ab_0    conda-forge
zipp                      3.17.0             pyhd8ed1ab_0    conda-forge
zlib                      1.2.13               hd590300_5    conda-forge
zlib-ng                   2.0.7                h0b41bf4_0    conda-forge
zstd                      1.5.5                hfc55251_0    conda-forge
leewujung commented 5 months ago

Thanks @eeholmes. This turned out to be a necessary warning, that we were not encoding the time correctly with int64 at nanosecond resolution. The instruments likely don't have that resolution, but it's good to be faithful to what the data file contains. This is now addressed in echopype v0.8.4 via https://github.com/OSOceanAcoustics/echopype/issues/1290.

Also, the notebook failing of notebook using echopype v0.8.3 was due to the input argument change to compute_MVBS introduced in v0.8.2. The notebook is updated in #42, so I'll close this once that's merged.