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OceaneCsn / DIANE

Dashboard for the Inference and Analysis of Networks from Expression data
GNU General Public License v3.0
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command lines for each module #39

Closed gorliver closed 2 years ago

gorliver commented 2 years ago

Is there a document to show the command lines used for each module?

OceaneCsn commented 2 years ago

Hi, the functions of DIANE are all described in this reference. An example of their use is available in this vignette. Their usage in the shiny modules of the app can be browsed is in the R/ folder of the package source code (files with "module" in their names). To finish, if you download the HTML reports of your analysis in the app, you will get a number of the command lines used in your analysis (in the code sections), and also the settings that should allow you to re-run the all the command lines from a script, just as in the vignette.

gorliver commented 2 years ago

Great! Thank you for the documents!