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Oefenweb / ansible-r

Ansible role to set up (the latest version of) R in Ubuntu systems
MIT License
42 stars 27 forks source link

littler #10

Closed danhalligan closed 8 years ago

danhalligan commented 8 years ago

Hi again,

FYI, I've forked this repository again and made modifications to remove the littler dependency (and just use Rscript instead which is included with the standard R installation). I did this firstly because its one less dependency, but also because I noticed a weird issue with littler for bioconductor package installations. I can't quite figure out what's going on, but it looks like when running the script R-install-pacakge through littler, bioconductor attempted to install out of date packages if they'd been recently updated, but I don't see this issue with Rscript. Anyway, this solves an issue for me, and if I get chance I'll investigate. If your interested in incorporating this change I can issue a pull request.

Best, Dan

tersmitten commented 8 years ago

Feel free to open a PR. Thanks in advance.

tersmitten commented 8 years ago

Fixed in #12