Olink-Proteomics / OlinkRPackage

Olink R package: A collection of functions to facilitate analysis of proteomic data from Olink. The goal of this package is to help users extract biological insights from proteomic data run on the Olink platform.
GNU Affero General Public License v3.0
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Assess if an assay is bridgeable #447

Closed klevdiamanti closed 3 days ago

klevdiamanti commented 1 week ago

Title: Assess if an assay is bridgeable

Problem: In the normalization of data from Olink Explore HT and Olink Explore 3072 we need to identify assays that can be bridged using median adjustment normalization (bridge normalization) and quantile quantile normalization (quantile smoothing), or non-bridgeable at all.

Solution: Write a function that performs all necessary checks to determine if an assay is bridgeable or not.

Key Features:

Checklist

Type of changes

What type of changes does your code introduce? Put an x in the boxes that apply

Further comments

This is standardizing the code from #438 to utilize features developed to make olink_normalization more versatile.

klevdiamanti commented 3 days ago

All points addressed and no new code was commited. Merging.