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OmicsML / dance

DANCE: a deep learning library and benchmark platform for single-cell analysis
https://pydance.readthedocs.io
BSD 2-Clause "Simplified" License
344 stars 33 forks source link

libcusparse.so.11 #436

Closed arashyunesi closed 4 months ago

arashyunesi commented 4 months ago

I followed the install.sh file to install dance in a conda env. Now I am following the tutorial. I am getting this error "OSError: libcusparse.so.11: cannot open shared object file: No such file or directory" when running "from dance.datasets.singlemodality import ClusteringDataset" I don't know where the issue is coming from. I appreciate any suggestions.

wehos commented 4 months ago

Duplicate with this issue.

arashyunesi commented 4 months ago

I added "export LD_LIBRARY_PATH=/path/to/lib" to the .bashrc file and restarted the kernel it worked. Another option is to avoid overwriting previous LD_LIBRARY path by adding "export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/path/to/lib" instead. Thank you @wehos