OmniSearch / ncro

Non-Coding RNA Ontology
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Four quick fixes in ncro.owl #14

Closed Huang-OMIT closed 8 years ago

Huang-OMIT commented 8 years ago

(1) <rdf:RDF xmlns="http://purl.obolibrary.org/obo/ncro-obo-WorkingVersion-06302015.owl#" needs to be changed to: <rdf:RDF xmlns="http://purl.obolibrary.org/obo/ncro.owl#"

(2) xml:base="http://purl.obolibrary.org/obo/ncro-obo-WorkingVersion-06302015.owl" needs to be changed to: xml:base="http://purl.obolibrary.org/obo/ncro.owl"

(3)

needs to be changed to:

(4)

needs to be changed to:

BTW, a quick question: the ncro.owl file contains a non-existing URL (http://purl.obolibrary.org/obo/ncro-obo-WorkingVersion-06302015.owl), why it can still be opened in Protege without errors?

Huang-OMIT commented 8 years ago

For some reason, (3) and (4) were not included in the original message. Here they are:

(3)

needs to be changed to:

(4)

needs to be changed to:

Huang-OMIT commented 8 years ago

Still not showing...Try again:

(3)

needs to be changed to:

(4)

needs to be changed to:

Huang-OMIT commented 8 years ago

Alan: I gave up. Will shoot you an email now...

alanruttenberg commented 8 years ago

(1) and (2) don't need to be changed, just removed or changed to http://purl.obolibrary.org/obo/. The xml:base is the default prefix for relative URLs. However we don't have relative URLs (deliberately) and http://purl.obolibrary.org/obo/ncro.owl# would be wrong if we did - it would be http://purl.obolibrary.org/obo/

Regarding your missing lines, code like that needs to be with a certain markdown directive. Put three backticks '```' before and after the block that should be considered literal.

<!-- http://purl.obolibrary.org/obo/ncro-obo-WorkingVersion-06302015.owl#IAO_0000117 -->
needs to be changed to:
<!-- http://purl.obolibrary.org/obo/IAO_0000117 -->
Huang-OMIT commented 8 years ago

Good to know these explanations.