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OndrejSladky / kmercamel

KmerCamel🐫 provides implementations of several algorithms for efficiently representing a set of k-mers as a masked superstring.
MIT License
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Draft: Improvements in parser #71

Closed OndrejSladky closed 1 month ago

OndrejSladky commented 1 month ago

Parser now uses kseq.h plus utilizes additional optimizations on the level of sequence parser, which brings: