OntoZoo / ontobee

Ontobee is a linked data server for ontologies. See: http://www.ontobee.org.
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coordinate with identifiers.org to #21

Open cmungall opened 10 years ago

cmungall commented 10 years ago

See https://sourceforge.net/p/identifiers-org/new-collection/16/

Due to the obolibrary ID scheme which replaces ':'s with '_'s, identifiers.org cannot plug in ontobee as a resolver for uberon, cl, etc which is unfortunate.

Judging by Nick's response, if ontobee can implement a resolution service such that standard colon-separated IDs are used to redirect to the purl then we can plug in ontobee.

This could be formalized via some kind of shared json-ld context file with entries like

UBERON: "http://purl.obolibrary.org/obo/UBERON_"

Making UBERON:0007225 a valid curie for http://purl.obolibrary.org/obo/UBERON_0007225

mcourtot commented 10 years ago

I thought the point of using _ instead of : was that the latter was not valid in RDF/XML, which is not really dependent on the OBO ID policy.

I guess I’m not clear what is the redirection that Nick would need. Why does identifiers.org not use the Uberon URIs for example?

On Jul 31, 2014, at 3:42 PM, Chris Mungall notifications@github.com wrote:

See https://sourceforge.net/p/identifiers-org/new-collection/16/

Due to the obolibrary ID scheme which replaces ':'s with '_'s, identifiers.org cannot plug in ontobee as a resolver for uberon, cl, etc which is unfortunate.

Judging by Nick's response, if ontobee can implement a resolution service such that standard colon-separated IDs are used to redirect to the purl then we can plug in ontobee.

This could be formalized via some kind of shared json-ld context file with entries like

UBERON: "http://purl.obolibrary.org/obo/UBERON_"

Making UBERON:0007225 a valid curie for http://purl.obolibrary.org/obo/UBERON_0007225

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