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Interstitial:plasma partition coefficients are the same for all organs, but intracellular:plasma are different. Why? #630

Closed eburg007 closed 3 years ago

eburg007 commented 3 years ago

Basically the title. In my simulation, my interstitial:plasma partition coefficients are all = 0.96, while the intracellular:plasma range from 0.51 (bone) to 0.83 (lung and muscle).

I'm also a bit confused about why there is an intracellular:plasma partition coefficient in the first place, since this skips over the interstitial space? (unless intracellular refers to RBCs in this case?)

Thanks!

StephanSchaller commented 3 years ago

If you go through the literature on partitioning coefficients, you might find tissue:plasma partitioning. In (most) PBPK models, tissue is separated into intracellular and interstitial, which requires the partitioning coefficients between plasma, interstitial and intracellular.

The intracellular:plasma PC is kind of an artefact of this compartmental structure and is there as a "surrogate" for the tissue:plasma PC... for the interstitial:plasma PC, it is assumed that the composition of the interstitial space is similar between organs and thus you get the same value for all organs here...

For more details (and a more precise/technical explanation), please refer to the literature provided in the documentation

Best, Stephan

eburg007 commented 3 years ago

Thank you!!