search

Open-Systems-Pharmacology / OSPSuite-R

R package for the OSPSuite
https://www.open-systems-pharmacology.org/OSPSuite-R/
Other
29 stars 12 forks source link

nuget dependency of OSP-suite incompatible with latest ubuntu version #1496

Closed RobinM92 closed 3 days ago

RobinM92 commented 1 week ago

Dear OSPSuite-R developers,

R just released version 4.4.2. Rocker/verse, our source for base docker images with R/Rstudio, released a corresponding image. That images uses ubuntu 24.04, which apparently cannot access the package "nuget", which is used by OSPSuite-R. "apt-get -y nuget" fails under ubuntu 24.04.

Is this a known issue and is there a workaround, is it possible to use the package without the dependency on nuget?

Thank you for all the work on this!

rwmcintosh commented 1 week ago

Are you using the release version of OSPSuite-R?

rwmcintosh commented 1 week ago

I just completed the installation of OSPSuite-R on Ubuntu 24.04 and did not encounter any requirements for Nuget.

I followed the steps for rSharp prerequisites but did not follow the optional steps to build rSharp binaries. If your goal is to use OSPSuite-R, you should not need those steps since prebuilt binaries will be used.

Then I followed the steps in README for GitHub based installation.

LMK where you run into this Nuget requirement.

RobinM92 commented 3 days ago

Hi @rwmcintosh

We now also installed it without nuget and it seems to work fine, so maybe there is no nuget-dependency anymore and it was a flunk by ubuntu, I don't know. Thanks a lot for testing it out on your side as well!