Yuri05
commented
2 years ago - tab_active_transports
- [ ] compartment_type: "COMPARTMENT"
- [ ] membrane: currently "Apical" or "Basolateral" or "BloodBrainBarrier"
- tab_application_types
- [ ] is_formulation_required: 0 or 1
- tab_applications
- [ ] container_type: "APPLICATION":
- tab_calculation_method_parameter_descr_conditions
- [ ] should_have: 0 or 1
- tab_calculation_method_parameter_rates
- [ ] min_isallowed: 0 or 1
- [ ] max_isallowed: 0 or 1
- [ ] can_be_varied: 0 or 1
- [ ] can_be_varied_in_population: 0 or 1
- [ ] read_only: 0 or 1
- [ ] visible: 0 or 1
- tab_categories
- [ ] category_type: "Model" Or "Individual" Or "Molecule" (define as standalone table to be consistent with other XXX_type, e.g. process_type, application_type, ... ?)
- tab_compound_process_parameter_mapping
- [ ] process_container_type: "PROCESS"
- tab_container_molecules
- [ ] visible: 0 or 1
- tab_container_parameter_curves
- [ ] min_isallowed: 0 or 1
- [ ] max_isallowed: 0 or 1
- tab_container_parameter_fcurves
- [ ] min_isallowed: 0 or 1
- [ ] max_isallowed: 0 or 1
- tab_container_parameter_rates
- [ ] min_isallowed: 0 or 1
- [ ] max_isallowed: 0 or 1
- tab_container_parameter_values
- [ ] min_isallowed: 0 or 1
- [ ] max_isallowed: 0 or 1
- tab_container_parameters
- [ ] can_be_varied: 0 or 1
- [ ] can_be_varied_in_population: 0 or 1
- [ ] read_only: 0 or 1
- [ ] visible: 0 or 1
- [ ] build_mode: "GLOBAL" Or "LOCAL" Or "PROPERTY"
- [ ] building_block_type: "SIMULATION" Or "PROTOCOL" Or "INDIVIDUAL" Or "FORMULATION" Or "COMPOUND" Or "APPLICATION" Or "Event" (define as standalone table to be consistent with other XXX_type, e.g. process_type, application_type, ... ?)
- [ ] is_input: 0 or 1
- tab_containers
- [ ] visible: 0 or 1
- [ ] is_logical: 0 or 1
- tab_event_changed_container_molecules
- [ ] use_as_value: 0 or 1
- [ ] use_amount: 0 or 1
- tab_event_changed_container_parameters
- [ ] use_as_value: 0 or 1
- tab_event_changed_generic_molecules
- [ ] use_as_value: 0 or 1
- [ ] use_amount: 0 or 1
- tab_event_changed_generic_parameters
- [ ] use_as_value: 0 or 1
- tab_event_conditions
- [ ] is_one_time: 0 or 1
- tab_formulation_routes
- [ ] container_type: "FORMULATION"
- tab_groups
- [ ] visible: 0 or 1
- [ ] is_advanced: 0 or 1
- tab_model_calculation_methods
- [ ] is_default: 0 or 1
- tab_model_container_molecules
- [ ] negative_values_allowed: 0 or 1
- [ ] is_present: 0 or 1
- tab_model_containers
- [ ] usage_in_individual: "REQUIRED" or "OPTIONAL" or "EXTENDED"
- tab_model_species
- [ ] is_default: 0 or 1 (where do we need this at all?)
- tab_model_transport_molecule_names
- [ ] should_transport: 0 or 1
- tab_molecule_parameters
- [ ] min_isallowed: 0 or 1
- [ ] max_isallowed: 0 or 1
- tab_molecules
- [ ] defalt_is_present:
- [ ] is_floating:
- [ ] molecule_type: "Drug" Or "Enzyme" Or "Metabolite" Or "Transporter" Or "Protein" Or "Undefined" (define as standalone table to be consistent with other XXX_type, e.g. process_type, application_type, ... ?)
- tab_observer_descriptor_conditions
- [ ] should_have: 0 or 1
- tab_observers
- [ ] ? observer_type: currently "Concentration" or "Excreted" or "Fraction" or "Metabolized"
- [ ] builder_type: "AMOUNT" or "CONTAINER"
- [ ] is_for_all_molecules: 0 or 1
- tab_organ_types
- [ ] container_type: "ORGAN"
- [ ] ? organ_type: currently "GiTractOrgans" or "Lumen" or "TissueOrgansNotInGiTract" or "VascularSystem"
- tab_populations
- [ ] is_age_dependent: 0 or 1
- [ ] is_height_dependent: 0 or 1
- tab_process_descriptor_conditions
- [ ] should_have: 0 or 1
- [ ] tag_type: "SOURCE" Oder "TARGET"
- tab_process_molecules
- [ ] direction: "IN" Or "OUT" Or "MODIFIER"
- [ ] stoichiometry: >0
- tab_processes
- [ ] container_type: "PROCESS"
- [ ] template: 0 or 1 (should be renamed to is_template)
- [ ] action_type: "REACTION" Or "APPLICATION" Or "TRANSPORT" Or "INTERACTION" (define as standalone table to be consistent with other XXX_type, e.g. process_type, application_type, ... ?)
- [ ] create_process_rate_parameter: 0 or 1
- tab_rate_container_molecules
- [ ] use_amount: 0 or 1
- tab_rate_generic_molecules
- [ ] use_amount: 0 or 1
- tab_species
- [ ] user_defined: 0 or 1
- [ ] is_human: 0 or 1 (where do we need this?)
- tab_value_origins
- [ ] source: "Publication" Or "Internet" Or "Database" Or "ParameterIdentification" Or "Other" Or "Unknown" Or "Undefined"
- [ ] method: "Assumption" Or "ManualFit" Or "ParameterIdentification" Or "Other" Or "Unknow" Or "InVitro" Or "InVivo" Or "Undefined"
msevestre