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Open-Systems-Pharmacology / S-Mephenytoin-Model

Whole-body PBPK model of s-mephenytoin as a substrate of CYP2C19
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Convert hyperlinks to lower case #3

Closed Yuri05 closed 2 years ago

Yuri05 commented 2 years ago

One of our automated link checkers is unfortunately case sensitive. To avoid false alarms all links must be written in lower case.

False alarms because of case sensitive error check ``` ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:35:73-99: - text: "Tracy 1999" - link: - anchor: 5-References ⛀ Anchor '5-References' is not present, did you mean 5-references (header I) at src:287:1-14? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:46:100-128: - text: "Kuepfer 2016" - link: - anchor: 5-References ⛀ Anchor '5-References' is not present, did you mean 5-references (header I) at src:287:1-14? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:46:379-431: - text: "PK-Sim Ontogeny Database Version 7.3" - link: - anchor: 5-References ⛀ Anchor '5-References' is not present, did you mean 5-references (header I) at src:287:1-14? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:48:157-209: - text: "PK-Sim Ontogeny Database Version 7.3" - link: - anchor: 5-References ⛀ Anchor '5-References' is not present, did you mean 5-references (header I) at src:287:1-14? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:48:212-242: - text: "Schlender 2016" - link: - anchor: 5-References ⛀ Anchor '5-References' is not present, did you mean 5-references (header I) at src:287:1-14? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:50:502-532: - text: "Nishimura 2003" - link: - anchor: 5-References ⛀ Anchor '5-References' is not present, did you mean 5-references (header I) at src:287:1-14? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:54:85-107: - text: "Section 2.2" - link: - anchor: 22-Data ⛀ Anchor '22-Data' is not present, did you mean 22-data (header II) at src:59:1-11? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:56:71-121: - text: "Section 2.3" - link: - anchor: 23-Model-Parameters-and-Assumptions ⛀ Anchor '23-Model-Parameters-and-Assumptions' is not present, did you mean 23-model-parameters-and-assumptions (header II) at src:108:1-39? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:67:47-76: - text: "Perdaems 2010" - link: - anchor: 5-References ⛀ Anchor '5-References' is not present, did you mean 5-references (header I) at src:287:1-14? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:68:39-69: - text: "Heikkinen 2012" - link: - anchor: 5-References ⛀ Anchor '5-References' is not present, did you mean 5-references (header I) at src:287:1-14? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:69:52-83: - text: "Sandstr\246m 1999" - link: - anchor: 5-References ⛀ Anchor '5-References' is not present, did you mean 5-references (header I) at src:287:1-14? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:70:37-67: - text: "Vogelpoel 2004" - link: - anchor: 5-References ⛀ Anchor '5-References' is not present, did you mean 5-references (header I) at src:287:1-14? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:71:36-68: - text: "Rowland-Yeo 2011" - link: - anchor: 5-References ⛀ Anchor '5-References' is not present, did you mean 5-references (header I) at src:287:1-14? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:72:28-60: - text: "Rowland-Yeo 2011" - link: - anchor: 5-References ⛀ Anchor '5-References' is not present, did you mean 5-references (header I) at src:287:1-14? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:85:3-33: - text: "Barbarash 1988" - link: - anchor: 5-References ⛀ Anchor '5-References' is not present, did you mean 5-references (header I) at src:287:1-14? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:86:3-32: - text: "Johnston 1981" - link: - anchor: 5-References ⛀ Anchor '5-References' is not present, did you mean 5-references (header I) at src:287:1-14? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:87:3-34: - text: "McAllister 1982" - link: - anchor: 5-References ⛀ Anchor '5-References' is not present, did you mean 5-references (header I) at src:287:1-14? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:98:3-29: - text: "Maeda 2011" - link: - anchor: 5-References ⛀ Anchor '5-References' is not present, did you mean 5-references (header I) at src:287:1-14? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:99:3-30: - text: "Streit 2005" - link: - anchor: 5-References ⛀ Anchor '5-References' is not present, did you mean 5-references (header I) at src:287:1-14? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:100:3-27: - text: "Hla 1987" - link: - anchor: 5-References ⛀ Anchor '5-References' is not present, did you mean 5-references (header I) at src:287:1-14? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:101:3-34: - text: "Joergenson 1988" - link: - anchor: 5-References ⛀ Anchor '5-References' is not present, did you mean 5-references (header I) at src:287:1-14? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:102:3-29: - text: "Shand 1981" - link: - anchor: 5-References ⛀ Anchor '5-References' is not present, did you mean 5-references (header I) at src:287:1-14? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:103:3-31: - text: "Johnson 2001" - link: - anchor: 5-References ⛀ Anchor '5-References' is not present, did you mean 5-references (header I) at src:287:1-14? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:104:3-29: - text: "Karim 1995" - link: - anchor: 5-References ⛀ Anchor '5-References' is not present, did you mean 5-references (header I) at src:287:1-14? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:121:95-127: - text: "Rowland-Yeo 2011" - link: - anchor: 5-References ⛀ Anchor '5-References' is not present, did you mean 5-references (header I) at src:287:1-14? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:141:139-173: - text: "Section 2.2.2" - link: - anchor: 222-Clinical-Data ⛀ Anchor '222-Clinical-Data' is not present, did you mean 222-clinical-data (header III) at src:75:1-23? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:145:56-96: - text: "Section 3.1" - link: - anchor: 31-Final-Input-Parameters ⛀ Anchor '31-Final-Input-Parameters' is not present, did you mean 31-final-input-parameters (header II) at src:150:1-29? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:146:33-68: - text: "Section 3.2" - link: - anchor: 32-Diagnostics-Plots ⛀ Anchor '32-Diagnostics-Plots' is not present, did you mean 32-diagnostics-plots (header II) at src:230:1-24? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:147:132-177: - text: "Section 3.3" - link: - anchor: 33-Concentration-Time-Profiles ⛀ Anchor '33-Concentration-Time-Profiles' is not present, did you mean 33-concentration-time-profiles (header II) at src:242:1-35? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:231:121-155: - text: "Section 2.2.2" - link: - anchor: 222-Clinical-Data ⛀ Anchor '222-Clinical-Data' is not present, did you mean 222-clinical-data (header III) at src:75:1-23? ➥ In file ./Verapamil/verapamil_evaluation_report.md bad reference (local) at src:243:77-111: - text: "Section 2.2.2" - link: - anchor: 222-Clinical-Data ⛀ Anchor '222-Clinical-Data' is not present, did you mean 222-clinical-data (header III) at src:75:1-23? 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PavelBal commented 2 years ago

You get the warnings from the Model Data Base Repo, right? @Yuri05 Please reopen if not.

The model snapshot repos have been updated (right now), I will also update the compiled reports in the data base soon.

Yuri05 commented 2 years ago

You get the warnings from the Model Data Base Repo, right?

Yes. Please also check if there are real invalid links (s. the comment https://github.com/Open-Systems-Pharmacology/OSP-PBPK-Model-Library/pull/64#issuecomment-1076485310) I didn't check which exactly models have them, due to the huge amount of wrongly reported fasle links. After the lower case is fixed, it will be easier to see.