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OpenBEL / openbel-framework

An open platform for capturing, integrating, storing, and sharing biological knowledge in and across organizations.
http://openbel.org
Apache License 2.0
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Memory usage regression issues with compiler #25

Open JamesMcMahon opened 12 years ago

JamesMcMahon commented 12 years ago

The memory requirements of the compiler seems to have spiked in the 2.0.0 release. For instance, to compile the Selventa Full Kam with Orthology information I needed to use 10 gigs of memory.

JamesMcMahon commented 12 years ago

I think this is unrelated to any issues caused by InnoDB. Even under MyISAM I still have need to use a large amount of memory.

I actually was wrong with the 10g memory needed above. I have yet to successfully compile and load full with orthologizes but if it's set to 10g it will eventually error our.

JamesMcMahon commented 12 years ago

12 gigs work for me.

nbargnesi commented 12 years ago

This has nothing to do with #26. This is caused by our fix for #10 that went out with 2.0.0.

jhourani commented 12 years ago

Look at closing this issue.