streamline gp_baseline workflow

OpenBEL / resource-generator

Python modules to generate BEL resource documents.

Apache License 2.0

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streamline gp_baseline workflow #40

Open ncatlett opened 11 years ago

ncatlett commented 11 years ago

Currently difficult to extend to new namespaces - requires modifications to gp_baseline, parsers, parsed, datasets, config, and namespaces/equivalence scripts

ncatlett commented 10 years ago

Methods for datasets now better aligned, so outputs match and default methods can be inherited. namespaces.py removed and replaced with write_ns_values method in datasets. Still needs significant work, particularly in gp_baseline around loading/re-loading of data for starting workflow in different phases.