Closed sbonaime closed 1 year ago
You need to check the full log for errors (which sometimes are not at the end). Make sure you're not running out of memory!
Ok the first Error I have is
CMake Error at cmake_install.cmake:125 (file):
file INSTALL cannot copy file
"/code/SuperBuild/build/gflags/gflags-registry-entry" to
"/home/bonaime/.cmake/packages/gflags/c872b97259e15f7dbf4904fb8eb2bb74":
Permission denied.
make[3]: *** [Makefile:105: install] Error 1
/code/SuperBuild/src/lastools/src/geoprojectionconverter.cpp: In member function ‘bool GeoProjectionConverter::set_VerticalCSTypeGeoKey(short int, char*)’:
/code/SuperBuild/src/lastools/src/geoprojectionconverter.cpp:4266:53: warning: format not a string literal and no format arguments [-Wformat-security]
4266 | if (description) sprintf(description, name);
| ^
make[2]: *** [CMakeFiles/gflags.dir/build.make:93: gflags/stamp/gflags-install] Error 2
make[1]: *** [CMakeFiles/Makefile2:499: CMakeFiles/gflags.dir/all] Error 2
make[1]: *** Waiting for unfinished jobs....
[ 30%] Building CXX object libs/mve/CMakeFiles/mve.dir/mesh_io_ply.cc.o
And I have those warnings
Installing collected packages: vmem, Shapely, repoze.lru, pytz, Pysolar, ODMExifRead, mpmath, flatbuffers, xmltodict, wrapt, urllib3, typing
-extensions, threadpoolctl, sympy, soupsieve, six, PyYAML, pyparsing, protobuf, Pillow, piexif, packaging, numpy, mypy-extensions, munch, lx
ml, kiwisolver, joblib, idna, humanfriendly, decorator, cycler, cloudpickle, click, charset-normalizer, certifi, attrs, affine, typing-inspe
ct, trimesh, tifffile, snuggs, scipy, requests, Pywavelets, python-dateutil, pyproj, networkx, marshmallow, imageio, fpdf2, edt, deprecated,
coloredlogs, codem, cligj, click-plugins, beautifulsoup4, appsettings, scikit-learn, scikit-image, requests-toolbelt, rasterio, pandas, onn
xruntime, matplotlib, Fiona, dataclasses-json, pyodm, pygltflib
WARNING: The script isympy is installed in '/home/bonaime/.local/bin' which is not on PATH.
Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
WARNING: The scripts f2py, f2py3 and f2py3.9 are installed in '/home/bonaime/.local/bin' which is not on PATH.
Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
WARNING: The script humanfriendly is installed in '/home/bonaime/.local/bin' which is not on PATH.
Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
WARNING: The script normalizer is installed in '/home/bonaime/.local/bin' which is not on PATH.
Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
WARNING: The scripts lsm2bin, tiff2fsspec, tiffcomment and tifffile are installed in '/home/bonaime/.local/bin' which is not on PATH.
Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
WARNING: The script pyproj is installed in '/home/bonaime/.local/bin' which is not on PATH.
I try to create a new user on my Debian with the same result.
Next idea was to change the gflags version in the make file from 2.1.2 to 2.2.2. And now I don't have any compilation issue ! :-)
@pierotofy Is there some reason to use gflags 2.1.2 from Mar 24, 2015 instead of 2.2.2 from Nov 11, 2018 ?
Thanks
Python 3.9.5 Debian BullEyes 5.10.179-2. gcc (Ubuntu 10.3.0-1ubuntu1) 10.3.0
Can not set up the required third party libraries after the docker build successfully
I install Miniconda for python and also try installing libpng-dev libjpeg-dev libz3-dev Here is the (long) error message after launching
bash configure.sh reinstall
. I cut some parts because log was too long...