OpenFreeEnergy / openfe

The Open Free Energy toolkit
https://docs.openfree.energy
MIT License
135 stars 18 forks source link

Add alchemical network creation userguide page #808

Closed IAlibay closed 5 months ago

IAlibay commented 6 months ago

Fixes #805 #790

Checklist

Developers certificate of origin

codecov[bot] commented 6 months ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Project coverage is 92.31%. Comparing base (0dd3a73) to head (2bb2d4e).

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #808 +/- ## ========================================== - Coverage 94.12% 92.31% -1.82% ========================================== Files 133 133 Lines 9767 9767 ========================================== - Hits 9193 9016 -177 - Misses 574 751 +177 ``` | [Flag](https://app.codecov.io/gh/OpenFreeEnergy/openfe/pull/808/flags?src=pr&el=flags&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=OpenFreeEnergy) | Coverage Δ | | |---|---|---| | [fast-tests](https://app.codecov.io/gh/OpenFreeEnergy/openfe/pull/808/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=OpenFreeEnergy) | `92.31% <ø> (?)` | | | [slow-tests](https://app.codecov.io/gh/OpenFreeEnergy/openfe/pull/808/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=OpenFreeEnergy) | `?` | | Flags with carried forward coverage won't be shown. [Click here](https://docs.codecov.io/docs/carryforward-flags?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=OpenFreeEnergy#carryforward-flags-in-the-pull-request-comment) to find out more.

:umbrella: View full report in Codecov by Sentry.
:loudspeaker: Have feedback on the report? Share it here.

IAlibay commented 5 months ago

Something's up with the cookbooks, for some reason the references aren't working. I suspect I won't have much time to hunt this one down, can someone else look into this?