OpenGene / GeneFuse

Gene fusion detection and visualization
MIT License
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Looking for "Encompassing Reads" in the output. #21

Closed chatchawit closed 3 years ago

chatchawit commented 4 years ago

I have a question. Does GeneFuse report "Encompassing Reads" in the output? Thank you.

Note: Encompassing reads are pairs of reads with each in the pair aligned to a different gene, thereby surrounding the fusion junctions or genomic breakpoints, and spanning reads are reads partially aligned to both genes corresponding to a fusion junction.