I am trying to create a kmerscollection of different viruses using fasta files but I get the error below for some fasta files.
Output 40/500: HW826641.1 JP 2014023536-A/12: Non-Diffusible Plant Virus Vector. unique: 5terminate called after throwing an instance of 'std::out_of_range'what(): basic_string::substr: __pos (which is 22) > this->size() (which is 21)/usr/bin/bash: line 1: 25212 Aborted
I am using standart fasta file downloaded from NCBI. I attached one of the problematic file in this issue (I have put it in txt but it his a .fa file normally).
I tried splitting the file in 1000 line but this seemed to not be the problem
I am trying to create a kmerscollection of different viruses using fasta files but I get the error below for some fasta files.
Output 40/500: HW826641.1 JP 2014023536-A/12: Non-Diffusible Plant Virus Vector. unique: 5terminate called after throwing an instance of 'std::out_of_range'what(): basic_string::substr: __pos (which is 22) > this->size() (which is 21)/usr/bin/bash: line 1: 25212 AbortedI am using standart fasta file downloaded from NCBI. I attached one of the problematic file in this issue (I have put it in txt but it his a .fa file normally).
I tried splitting the file in 1000 line but this seemed to not be the problem
Thank you for your time, TheBiotech
Virus_12305.txt