Open Zjianglin opened 5 years ago
I think it supports most non-ILLUMINA data. You can post your data (just some reads with adapters) if don't whether it can do, then we can take a look at your data.
Thans for your reply.
I downloadefd thousands of SRA from NCBI and I want to perform a preprocess QC on these SRAs for further analysis. Actually I don't know if one reads with adapters or not. So as you said, could I just preform fastp
process for all these reads?
I think you can. If you have any problem, just let me know.
Okay, Thank you~
Dear developers,
I am a bioinformatics student, and I plan to perform QC for many NGS reads data from several different sequencing platforms such as ILLUMINA, LS454, ION_TORRENT, and ABI_SOLID. Your excellent paper and
AfterQC
said thatCurrently it supports processing data from HiSeq 2000/2500/3000/4000, Nextseq 500/550, MiniSeq...and other Illumina 1.8 or newer formats
. I wonder if there is any method to perform adapters trimming for non-ILLUMINA data?Thanks, and I'm looking forward to your reply.