Could you add an option to trimming polyT from the 5'?

OpenGene / fastp

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

MIT License

1.86k stars 332 forks source link

Could you add an option to trimming polyT from the 5'? #301

Open haibol2016 opened 3 years ago

haibol2016 commented 3 years ago

Hello, Could you add an option to trimming polyT from the 5'? I think it is useful for filtering polyT stretches coming from polyA tails in unstranded RNA-seq data.

Thanks,

Haibo

Ann-Holmes commented 3 years ago

Hello,

I think you can try to filter these reads by the parameter, --low_complexity_filter.