igzip: invalid gzip header found

OpenGene / fastp

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

MIT License

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igzip: invalid gzip header found #390

Open xiaosefengyun opened 2 years ago

xiaosefengyun commented 2 years ago

7020ccc6c0027b0868641e5be4682a0 b9dd460bb6c2e3033b2405c74d0d0a4

after filter error: igzip: invalid gzip header found

LvLH commented 2 years ago

遇到相同问题了，ERROR: igzip: invalid gzip header found 不知道是不是fq下载的文件有问题，正在想办法校验数据传输前后的MD5

sfchen commented 2 years ago

Could you please try gunzip to see whether you can successfully decompress the data?

Claptar commented 10 months ago

I had this problem when my input files had the same name as input files

ZCJ0422 commented 3 weeks ago

I met the same problem. And I have check the completion of the file with md5sum, it is ok. The error message : "ERROR: igzip: Error invalid gzip header found: " And the fastp version is 0.23.4 Could you help me ? Thank you!