UMI extraction 3' end - Githubissues

OpenGene / fastp

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

MIT License

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UMI extraction 3' end #494

Open annajbott opened 1 year ago

annajbott commented 1 year ago

Hi, Fastp is a great tool!

I was wondering if it's possible to extract UMIs from both the 5' and 3' end of a fastq. Is there an option to specify that UMIs are located at the head and tail of a read? Thanks!

Best wishes, Anna

jammywwh commented 4 months ago

Also concerned about this issue. Look forward to reply. Best wishes, jammy woo