trimming adapters at the beginning of the read and IUPAC nucleotide codes

OpenGene / fastp

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

MIT License

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trimming adapters at the beginning of the read and IUPAC nucleotide codes #572

Open hrehrauer opened 4 months ago

hrehrauer commented 4 months ago

I have the situation where I do have adapters at the beginning of the read, as far as I can see, fastp does not support that, but it would be really helpful.

Another question, does fastp support IUPAC nucleotide codes? http://www.bioinformatics.org/sms/iupac.html This would also be very helpful.

Best Hubert