OpenMS / THIRDPARTY

External binary dependencies (e.g. search engine binaries) packaged in installers
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X!Tandem version #10

Closed mwalzer closed 7 years ago

mwalzer commented 7 years ago

from a build with recent checkouts of the respective development branches:

--   + X! Tandem binary found at tandem.exe -> Enabling corresponding tests.
--   - X! Tandem too old (). Please provide an X! Tandem version >= 2013.09.01 to enable the tests.
jpfeuffer commented 7 years ago

Works for the current Mac version. Can you post the XTandem output of your version?

jpfeuffer commented 7 years ago

Btw: This repo has no develop branch.

mwalzer commented 7 years ago

Yeah, I was trying to say 'the latest we use in other deployments and travis and so on'

mwalzer commented 7 years ago

Also works for most of my linux stuff. For alpine it is

/ $ ls -lah /opt/thirdparty/XTandem/tandem.exe 
-rwxr-xr-x    1 root     root      756.0K May 29 21:13 /opt/thirdparty/XTandem/tandem.exe
/ $ /opt/thirdparty/XTandem/tandem.exe
/bin/sh: /opt/thirdparty/XTandem/tandem.exe: not found

anyone know about special needs of tandem.exe like shell or shared libs?

jpfeuffer commented 7 years ago

https://github.com/gliderlabs/docker-alpine/issues/219

jpfeuffer commented 7 years ago

My tip: Do not use alpine

mwalzer commented 7 years ago

Darn, yes :man_facepalming: - I repressed all MUSL related memories from when I started building for alpine. Thanks for the link, didn't know about the compat lib! Yeah though, ~600Mb image for OpenMS+thirdparty sounds pretty neat to me, alas nasty stuff at some points. In any case: done. My tip: never stop trying something new.

jpfeuffer commented 7 years ago

Did you try reducing boost and QT to its minimum? Would be interesting, too, if we really need all that stuff in there.

jpfeuffer commented 7 years ago

Also superhirn might link in Xerces a second time, if you want some MB less.

mwalzer commented 7 years ago

cool! will try.