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OpenMS / pyopenms-docs

pyOpenMS readthedocs documentation, additional utilities, addons, scripts, and examples.
https://pyopenms.readthedocs.io
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Metabolomics- targeted feature extraction #207

Closed eeko-kon closed 2 years ago

eeko-kon commented 2 years ago

RuntimeError: Error: Peptide does not have retention time information which is necessary to perform an RT-limited extraction

Any idea what that error is? I am running FeatureFinderAlgorithmMetaboIdent with pyopenms.

eeko-kon commented 2 years ago

It s a problem on my side - there are no peptide aka MS2 annotations because my code mixes up the spectra mzml files and the featureXML ones