update map alignment visualization in example workflow

[axelwalter]

Plotting consensus maps before and after alignment with matplotlib according to the map alignment tutorial.

[jpfeuffer]

What happened with plotly?

[jpfeuffer]

I think it would be a cool showcase. You just forgot to import px

[axelwalter]

I removed it because this would be the only place where plotly is used, since we do everything else with matplotlib. Do you think it is better to keep that?

[jpfeuffer]

Hmm ok. We could also have a separate section on interactive plots and show an example with plotly.

[jpfeuffer]

No strong opinion. I see your point.

[jpfeuffer]

Did you show drawn compounds in the hover boxes?

[axelwalter]

Yes, the reason why I chose plotly in the first place is interactivity in the browser and notebooks. Maybe that is possible with something like mpld3 (https://mpld3.github.io/index.html). I like the idea with interactive plots so we should keep plotly in mind.

[jpfeuffer]

I mean plotly should definitely work in jupyter. With an extension, you can even interactively change the layout.

[axelwalter]

The compound names were passed in the hover_name argument to the scatter plot.

[jpfeuffer]

SMILES or formula?

[axelwalter]

Only the names. In the result df all possible compound names are attached to a feature, this list was shown on hover.

[timosachsenberg]

is this one working and done?

[axelwalter]

yes it's working