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OpenMS / pyopenms-docs

pyOpenMS readthedocs documentation, additional utilities, addons, scripts, and examples.
https://pyopenms.readthedocs.io
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PeakPickerHiRes issue with MSExperimentDF #244

Closed axelwalter closed 2 years ago

axelwalter commented 2 years ago

PeakPickerHiRes.pickExperiment() does not take the new MSExperimentDF as input and output maps. This issue happened locally and in the binder notebooks. In other cases, such as PeakPickerSH, the MSExperimentDF can be passed as argument without problem.

pyopenms/pyopenms_7.pyx in pyopenms.pyopenms_7.PeakPickerHiRes.pickExperiment()

Exception: can not handle type of (<pyopenms.dataframes.MSExperimentDF object at 0x7fa8a87de780>, <pyopenms.dataframes.MSExperimentDF object at 0x7fa8a87e1820>)

There are also no issues like that with the other DF classes, like FeatureMapDF.