Link fixin

[poshul]

Fixed a bunch of stale links, added files for future nase tutorial

[poshul]

Should I be worried about the failing build_test?

[jpfeuffer]

It seems we did not have a working pyopenms build in 30? days, so there is not artifact anymore.

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[timosachsenberg]

there are autofixes available: https://github.com/OpenMS/pyopenms-extra/pull/252/checks?check_run_id=4879571790 does anyone know how trustworthy those are?

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[timosachsenberg]

If the links work like this I think we can move forward here

[poshul]

Lint fails with ImportError: cannot import name 'soft_unicode' from 'markupsafe' (/usr/local/lib/python3.7/site-packages/markupsafe/__init__.py)

[jpfeuffer]

This is an error in the action. See their GitHub repo. Should be a comment from me as well. There is a workaround using a fork from someone. But maybe the action was updated by now. Please check.

[jpfeuffer]

@timosachsenberg when fixing the API docs I saw quite some warnings like XYZ.rst never referenced anywhere. Including hyper score. Can you check this? Just build yourself locally and you will see.

Indeed I cannot find hyperscore except in the search.

[jpfeuffer]

Unfortunately we have a lot of warning now from the API docs. We should check if we can filter them somehow. Or do CI without building the API docs, which also takes a few minutes.

[timosachsenberg]

Why are these not referenced? What is missing?

[timosachsenberg]

can you revive this so we can move it over the finish line?

[timosachsenberg]

cool! thanks