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OpenMS / pyopenms-docs

pyOpenMS readthedocs documentation, additional utilities, addons, scripts, and examples.
https://pyopenms.readthedocs.io
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Pandas export tutorial has warnings #279

Closed jpfeuffer closed 1 year ago

jpfeuffer commented 2 years ago

No idea how it was merged with failing tests but it always fails ipynb conversion. See latest PRs.

jpfeuffer commented 2 years ago

Something in the CSV tables probably

axelwalter commented 2 years ago

Just checked the table formatting in the rst files, there were some inconsistencies with tabs and spaces. Let's see if the resolves the issue.

jpfeuffer commented 2 years ago

yes, better:

Warning: Reference not found for 'Key "q86uq0"' at pandas_df_conversion.rst_chunk line 1 column 17 Warning: Reference not found for 'Key "p61313"' at pandas_df_conversion.rst_chunk line 1 column 11

jpfeuffer commented 2 years ago

But at least it works now.

timosachsenberg commented 1 year ago

todo: try to debug what is going on here