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OpenMS / streamlit-template

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provide streamlit config file inside docker #63

Closed Arslan-Siraj closed 5 months ago

Arslan-Siraj commented 5 months ago

User description

PR Type

enhancement, configuration changes

Description

Changes walkthrough 📝

Relevant files
Enhancement
4_📖_Windows_executable.py
Update markdown content URLs to new repository                     
pages/4_📖_Windows_executable.py
  • Updated URLs for fetching markdown content to point to the OpenMS
    repository.
    		•  +2/-2     
    Configuration changes
    config.toml
    Update server port configuration in Streamlit config         
    .streamlit/config.toml - Changed the server port configuration to 8501.
    		+1/-1     
    Dockerfile
    Include Streamlit configuration file in Docker image         
    Dockerfile
  • Added a line to copy the Streamlit configuration file into the Docker
    image.
    		•  +2/-0     

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    codiumai-pr-agent-pro[bot] commented 5 months ago

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    PR Review 🔍

    ⏱️ Estimated effort to review [1-5] 2, because the changes are straightforward and limited to configuration and URL updates. The PR modifies URLs in a Python script, changes a port configuration in a TOML file, and updates the Dockerfile to include a new configuration file. These changes are not complex and should be easy to review for correctness.
    🧪 Relevant tests No
    ⚡ Possible issues Possible Bug: The hardcoded URLs in the Python script might not be the most maintainable approach. Consider using environment variables or a configuration file to manage URLs.
    🔒 Security concerns No
    codiumai-pr-agent-pro[bot] commented 5 months ago

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    PR Code Suggestions ✨

    CategorySuggestion                                                                                                                                    Score
    Maintainability
    Define a base URL constant to avoid redundancy and potential errors ___ **To avoid redundancy and potential errors, consider defining the base URL as a constant and
    appending the specific paths for each tab.** [pages/4_📖_Windows_executable.py [57]](https://github.com/OpenMS/streamlit-template/pull/63/files#diff-3928e177db9b223dbc6e3ab4ad55800a8458e5d472b15fc8250c10cb0b744449R57-R57) ```diff -markdown_url = "https://raw.githubusercontent.com/OpenMS/streamlit-template/main/win_exe_with_embed_py.md" +BASE_URL = "https://raw.githubusercontent.com/OpenMS/streamlit-template/main/" +markdown_url = BASE_URL + "win_exe_with_embed_py.md" ```
    Suggestion importance[1-10]: 8 Why: Defining a base URL as a constant reduces redundancy and potential errors in URL management across different sections of the code.
    		8
    Enhancement
    Make the port number configurable via environment variables for flexibility ___ **Ensure that the port number is configurable via environment variables to allow flexibility
    in different deployment environments.** [.streamlit/config.toml [5]](https://github.com/OpenMS/streamlit-template/pull/63/files#diff-a7f7962e3e1209cfc31a2d3faee8dd8fdd5341f7249033e948c6539eae0a47c3R5-R5) ```diff -port = 8501 # should be same as configured in deployment repo +port = ${PORT:-8501} # should be same as configured in deployment repo ```
    Suggestion importance[1-10]: 8 Why: Making the port number configurable via environment variables enhances flexibility and adaptability in different deployment environments.
    		8
    Possible issue
    Add error handling for the content retrieval from the URL ___ **Consider adding a check to ensure that fetch_markdown_content successfully retrieves the
    content from the URL. This can help handle cases where the URL might be incorrect or the
    server is down.** [pages/4_📖_Windows_executable.py [59]](https://github.com/OpenMS/streamlit-template/pull/63/files#diff-3928e177db9b223dbc6e3ab4ad55800a8458e5d472b15fc8250c10cb0b744449R59-R59) ```diff markdown_content = fetch_markdown_content(markdown_url) +if not markdown_content: + st.error("Failed to retrieve content. Please check the URL or try again later.") ```
    Suggestion importance[1-10]: 7 Why: Adding error handling for content retrieval is a good practice to ensure robustness, especially when dealing with external resources.
    		7
    Best practice
    Add a .dockerignore file to exclude unnecessary files from the Docker build context ___ **Consider adding a .dockerignore file to exclude unnecessary files and directories from the
    Docker build context, which can help reduce the image size and build time.** [Dockerfile [118]](https://github.com/OpenMS/streamlit-template/pull/63/files#diff-dd2c0eb6ea5cfc6c4bd4eac30934e2d5746747af48fef6da689e85b752f39557R118-R118) ```diff +# Add a .dockerignore file to exclude unnecessary files COPY .streamlit/config.toml /app/.streamlit/config.toml ```
    Suggestion importance[1-10]: 7 Why: Adding a `.dockerignore` file is a best practice to reduce Docker image size and build time by excluding unnecessary files.
    		7