OpenMendel OrdinalGWAS.jl issues

OpenMendel / OrdinalGWAS.jl

Genome-wide association studies (GWAS) for ordered categorical phenotypes

https://openmendel.github.io/OrdinalGWAS.jl/latest/

MIT License

21 stars 7 forks source link

issues

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Analysis code

#39 Yukalabo opened 7 months ago
3
CompatHelper: bump compat for BGEN to 0.2, (keep existing compat)

#38 github-actions[bot] opened 10 months ago
0
Documentation Note 2

#37 cassondranewman opened 1 year ago
1
Documentation Note 1

#36 cassondranewman opened 1 year ago
1
CompatHelper: bump compat for StatsModels to 0.7, (keep existing compat)

#35 github-actions[bot] closed 1 year ago
1
Syntax of covrowinds and geneticrowinds

#34 came203 opened 1 year ago
1
VCF file with imputed data

#33 came203 opened 1 year ago
2
Specifying null model w/out covariates?

#32 pmagwene closed 2 years ago
4
Print out ref/alt allele

#31 kose-y closed 1 year ago
1
CompatHelper: bump compat for MathOptInterface to 1, (keep existing compat)

#30 github-actions[bot] closed 2 years ago
2
CompatHelper: bump compat for CSV to 0.10, (keep existing compat)

#29 github-actions[bot] closed 2 years ago
1
tested allele in LRT

#28 lisongmiller closed 2 years ago
1
Update for OrdinalMultinomialModel 0.4

#27 kose-y closed 2 years ago
0
update CI.yml in GitHub actions

#26 Hua-Zhou closed 2 years ago
1
CompatHelper: bump compat for CSV to 0.9, (keep existing compat)

#25 github-actions[bot] closed 2 years ago
1
TagBot trigger issue

#24 JuliaTagBot closed 3 years ago
10
compat update

#23 kose-y closed 3 years ago
1
ERROR: DomainError with -8.497357787491502e13: sqrt will only return a complex result if called with a complex argument. Try sqrt(Complex(x)).

#22 c0rbeau closed 3 years ago
6
VCF file input

#21 c0rbeau closed 3 years ago
2
remove manifest.toml

#20 kose-y closed 3 years ago
1
ERROR: AssertionError: decompressed length mismatch

#19 XUKEREN closed 3 years ago
9
CompatHelper: add new compat entry for "Reexport" at version "1"

#18 github-actions[bot] closed 3 years ago
0
CompatHelper: add new compat entry for "Distributions" at version "0.25"

#17 github-actions[bot] closed 3 years ago
0
CompatHelper: add new compat entry for "Reexport" at version "1.0"

#16 github-actions[bot] closed 3 years ago
0
CompatHelper: add new compat entry for "GeneticVariation" at version "0.4"

#15 github-actions[bot] closed 3 years ago
0
CompatHelper: add new compat entry for "Distributions" at version "0.24"

#14 github-actions[bot] closed 3 years ago
0
CompatHelper: add new compat entry for "CSV" at version "0.8"

#13 github-actions[bot] closed 3 years ago
0
categorical cavariates data

#12 lisongmiller closed 4 years ago
1
test data for proportional odds assumption

#11 lisongmiller closed 4 years ago
2
support for imputed data

#10 ghost closed 4 years ago
3
covariate dataset

#9 rthapa1 closed 4 years ago
5
Have row mask filter out covariate file

#8 chris-german closed 5 years ago
1
allow input and output files in gz or other compressed format

#7 Hua-Zhou closed 5 years ago
1
adopt same input format as Plink

#6 Hua-Zhou closed 4 years ago
0
feature request: add keyword 'snpmodel' to allow user specific SNP model (additive, dominant, recessive)

#5 Hua-Zhou closed 5 years ago
0
SNP set tests

#4 jinjinzhou closed 5 years ago
1
VCF input

#3 Hua-Zhou closed 4 years ago
1
Julia v0.7/v1.0 compatibility

#2 Hua-Zhou closed 5 years ago
0
exclude individuals and/or SNPs in GWAS

#1 Hua-Zhou closed 5 years ago
1