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OpenOmics
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assembly-seek
De novo Long-read Genome Assembly Pipeline
https://openomics.github.io/assembly-seek/
MIT License
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Update docs and help/usage information for the run sub command
#15
skchronicles
opened
9 months ago
0
Update fastq file inputs, enforce gzipp-ed inputs
#14
skchronicles
opened
9 months ago
1
Stats busco
#13
asyakhl
closed
10 months ago
0
updating hifiasm rule
#12
asyakhl
closed
11 months ago
0
Busco rules need to be fixed
#11
asyakhl
opened
11 months ago
0
hifiasm rule needs updating
#10
asyakhl
opened
11 months ago
0
raven_assembler updated with docker image
#9
asyakhl
closed
11 months ago
0
Fully debugged pipeline
#8
asyakhl
closed
1 year ago
0
resolves issues 1, 2, 3 and fixes/adjusts Snakemake rules
#7
asyakhl
closed
1 year ago
2
Snakemake remade and integrated into pipeline framework
#6
asyakhl
closed
1 year ago
0
Add new tool: Bandage
#5
skchronicles
closed
1 year ago
1
Add new tool: AGB
#4
skchronicles
closed
1 year ago
0
Add a new command-line option: `--estimated-coverage`
#3
skchronicles
closed
1 year ago
0
Update flye version to 2.9.1
#2
skchronicles
closed
1 year ago
0
Add new command-line option: `--assemblers`
#1
skchronicles
closed
1 year ago
0