OpenOmics / chrom-seek

An awesome set of epigenetic pipelines for bulk cfChip-seq, ChIP-seq, and ATAC-seq
https://openomics.github.io/chrom-seek/
MIT License
5 stars 2 forks source link

DiffBind, ngsqc, and ppqt scripts updates #1

Closed tovahmarkowitz closed 1 year ago

tovahmarkowitz commented 1 year ago

-- Adding new DiffBind python script to prep csv input file -- Removing DiffBind rmarkdown run scripts -- Removing NGSQC python script -- Adding new ppqt python script designed to extract the estimated fragment length value and prepare it for downstream steps