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OpenSourceBrain / AllenInstituteNeuroML

Example files to test interaction between models developed at the Allen Brain Institute and NeuroML
http://www.opensourcebrain.org/projects/alleninstituteneuroml
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Add GitHub actions to test model tuning #14

Closed pgleeson closed 2 years ago

pgleeson commented 2 years ago

Similar to #13, add tests for simple tuning example (to check python dependencies etc.) in https://github.com/OpenSourceBrain/AllenInstituteNeuroML/tree/master/CellTypesDatabase/tune

Summarise steps in README also.

anujanegi commented 2 years ago

These tuning options in tuneAllen.py are broken: -quick, -izhquick, -2stage, -izh2stage

pgleeson commented 2 years ago

@anujanegi python tuneAllen.py -izhquick worked fine for me. Can you check you have the latest versions of pyneuroml, neurotune & pyelectro

sanjayankur31 commented 2 years ago

These tuning options in tuneAllen.py are broken: -quick, -izhquick, -2stage, -izh2stage

Also good to note what errors you get please---that way we have a better chance of indicating/diagnosing what the issue may be