OpenSourceBrain / AllenInstituteNeuroML

Example files to test interaction between models developed at the Allen Brain Institute and NeuroML
http://www.opensourcebrain.org/projects/alleninstituteneuroml
Other
16 stars 10 forks source link

Converting all-active cell types #18

Closed anujanegi closed 2 years ago

anujanegi commented 2 years ago

Currently trying to convert the all-active cell model 497233223 of this electrophysiology.

The cell contains information about e_pas and g_pas which are the leakage reverse potential and specific leakage conductance of the pas channel respectively. image

When converting this to NeuroML, the e_pas value is set using the erev parameter (see here). How to translate g_pas to NeuroML? @pgleeson @sanjayankur31

anujanegi commented 2 years ago

https://github.com/OpenSourceBrain/AllenInstituteNeuroML/blob/f2b5bbf265b828c0a57b615ad6263ed561073fbd/CellTypesDatabase/models/ParseAll.py#L196-L200