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OpenSourceBrain / NWBShowcase

OSB Showcase project containing examples of NWB data
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Run NWB Inspector validation on NWB files in this repo #39

Open pgleeson opened 1 year ago

pgleeson commented 1 year ago

@anhknguyen96 If you have time, or if you hit a roadblock with the NWB Widgets validation, could you look at a way to quickly run NWB Inspector validation on the NWB files included in here? It would be very useful to see how these stack up against "official" best practices, as many of these have been used to design and test NWBE.

It could be as simple as creating a script in a new validation_tests subfolder, searches through the file heirarchy and generates a text file summary similar to DANDI of any NWB file it finds.

anhknguyen96 commented 1 year ago

sure, that's doable.

anhknguyen96 commented 1 year ago

the script is here on the dev branch of DANDIArchiveShowcase. If you want to test the files in this repo, run the script in terminal, or if you want to test a bunch of nwb files in your local machine, run python nwbinspector_bulk.py --folder_path and it would ask you for the folder path. Output will be validation report(s).

The validation reports for the files in this repo is here