OpenSourceBrain / NWBShowcase

OSB Showcase project containing examples of NWB data
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Potential dataset to convert: Blue Brain Project data #4

Open pgleeson opened 5 years ago

pgleeson commented 5 years ago

http://microcircuits.epfl.ch/#/article/article_4_eph

lvsltz commented 4 years ago

Data at https://channelpedia.epfl.ch/ is being converted to NWB2 (from NWB1). NWB2 sample data (full datasets to be released in the next months) https://drive.google.com/open?id=1HQPYqkV6zsyzFoG6qSnHXdkzV4a7HuV2

Perhaps not relevant to this issue: the pynwb extension: https://github.com/lvsltz/ndx-bbp-icephys-hierarchy

@EnricoScanta

pgleeson commented 4 years ago

Thanks @lvsltz. I've tried them with NWBExplorer, and getting an error re:

'ndx-icephys-meta' not a namespace

Will try hard coding link to namespace and recompile... Related to: https://github.com/MetaCell/nwb-explorer/issues/151

lvsltz commented 4 years ago

This is the extension: https://github.com/oruebel/ndx-icephys-meta

Might also be related to https://github.com/NeurodataWithoutBorders/matnwb/issues/202 and will perhaps be solved by the next pynwb release (schema 2.2.4).