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OpenTreeOfLife / phylesystem-api

API access to Open Tree of Life treestore
BSD 2-Clause "Simplified" License
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Feature request: Import/export for OTU mapping #230

Closed Artoria2e5 closed 2 years ago

Artoria2e5 commented 3 years ago

Following my frustration with the OTU editing thing, may I ask for an import/export functionality for the OTU mapping of studies? I expect a TSV format where the three columns are the original (in-tree) name, the candidate mapping name, and the OTT taxonomy id number.

I feel that I might be able to do it faster off-line with an OTT dump.

Artoria2e5 commented 3 years ago

Oops, I thought I was in the opentree repo! Can both of my issues be transferred if a maintainer sees this?

jimallman commented 3 years ago

Hi, @Artoria2e5. I'm making a new issue in our feedback repository that points to these. (I'm a web-app developer for the Open Tree project.) Our bulk TNRS tool might work better for your situation, though it shares a lot of the same client-side code with the OTU mapping tool in the study editor.

Artoria2e5 commented 2 years ago

Gonna close the issue now that a proper one has been created. Don't wanna clog the open list up :)