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OstfriesenBI / PredmiRNA

A set of scripts and tools to train a classifier for pre-miRNA Recognition
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Feature calculation: ss-motifs #16

Closed Finesim97 closed 5 years ago

Finesim97 commented 5 years ago

This one is hard. This paper: https://doi.org/10.1371/journal.pone.0032797 Describes a way to generate motifs from the different miRNA Input: csv file with the sequences and secondary structure:

"comment","secstructure"
"Test123 457Test healp","(((((((..(((.((((.(....(((((.(((((....)))).)..).))))....).)))).))))))))))."
"fefefe wefwe ffff", "(((((.......)))))............................"

Output: ?

Finesim97 commented 5 years ago

This seems to be to much work for almost no gain.