search

OttoStruve / muler

A Python package for working with pipeline-produced spectra from IGRINS, HPF, and Keck NIRSPEC
https://muler.readthedocs.io
MIT License
15 stars 9 forks source link

Plot does not show up #125

Closed nedahejazi closed 1 year ago

nedahejazi commented 1 year ago

Everything seems setup, but when running muler:

import numpy from muler.igrins import IGRINSSpectrumList path_H = '/Users/n085h663/Documents/Sample_IGRINS_JWST/IGRINS_Our_2023/SDCH_20230119_0022.spec_a0v.fits'

spec_list = IGRINSSpectrumList.read(path_H) spec_list.remove_nans().trim_edges().normalize().plot(color=None, ylo=0, yhi=5)

No plot shows up, while there is no error. Nothing happens

gully commented 1 year ago

Hi @nedahejazi, thanks for your interest in muler for IGRINS spectra. Are you using a Jupyter Notebook? If so, sometimes the no-plot-showing-up symptom you described can go away if you use the matplotlib inline magic function:

%matplotlib inline

Execute a cell with that command towards the top of your notebook and then restart and re-run your notebook. Does that solve your problem?

nedahejazi commented 1 year ago

Hi @gully,

Yes! That works. Thank you so much for your help.