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PASTA-ELN / pasta-eln

PASTA-ELN with new frontend
https://pasta-eln.github.io/pasta-eln/
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Issues during the corrosion data import #232

Closed HTsybenko closed 3 months ago

HTsybenko commented 4 months ago

After executing the "python -m pasta_eln.serverActions" command and following all steps, a following error occurs:

[1] couchDB_backup_127001_20240316T140124.zip Which file to use for restored? (1-1) 1 Traceback (most recent call last): File "/usr/lib/python3.10/runpy.py", line 196, in _run_module_as_main return _run_code(code, main_globals, None, File "/usr/lib/python3.10/runpy.py", line 86, in _run_code exec(code, run_globals) File "/home/htsybenko/Temp/envir/lib/python3.10/site-packages/pasta_eln/serverActions.py", line 582, in main() File "/home/htsybenko/Temp/envir/lib/python3.10/site-packages/pasta_eln/serverActions.py", line 559, in main restoreCouchDB() File "/home/htsybenko/Temp/envir/lib/python3.10/site-packages/pasta_eln/serverActions.py", line 456, in restoreCouchDB docID = fileParts[1] IndexError: list index out of range

HTsybenko commented 3 months ago

In 2.5.1b1, this error occurs:

[1] couchDB_backup_127001_20240316T140124.zip Which file to use for restored? (1-1) 1 Traceback (most recent call last): File "/usr/lib/python3.10/runpy.py", line 196, in _run_module_as_main return _run_code(code, main_globals, None, File "/usr/lib/python3.10/runpy.py", line 86, in _run_code exec(code, run_globals) File "/home/htsybenko/Temp/envir/lib/python3.10/site-packages/pasta_eln/serverActions.py", line 586, in main() File "/home/htsybenko/Temp/envir/lib/python3.10/site-packages/pasta_eln/serverActions.py", line 563, in main restoreCouchDB() File "/home/htsybenko/Temp/envir/lib/python3.10/site-packages/pasta_eln/serverActions.py", line 458, in restoreCouchDB docID = fileParts[1] IndexError: list index out of range

SteffenBrinckmann commented 3 months ago

This is fixed in version 2.5.1 already, but wait for HT to verify

HTsybenko commented 3 months ago

The corrosion data can be imported after the fix.

However, the import ends with the following error again:

... Saved document: research m-9c4cb5bb637049f49aab6b4_00860234 Saved document: research m-9c4cb5bb637049f49aab6b4_00010707 Saved document: research m-9c4cb5bb637049f49aab6b4_00530014 Traceback (most recent call last): File "/usr/lib/python3.10/runpy.py", line 196, in _run_module_as_main return _run_code(code, main_globals, None, File "/usr/lib/python3.10/runpy.py", line 86, in _run_code exec(code, run_globals) File "/home/htsybenko/Temp/envir/lib/python3.10/site-packages/pasta_eln/serverActions.py", line 589, in main() File "/home/htsybenko/Temp/envir/lib/python3.10/site-packages/pasta_eln/serverActions.py", line 566, in main restoreCouchDB() File "/home/htsybenko/Temp/envir/lib/python3.10/site-packages/pasta_eln/serverActions.py", line 492, in restoreCouchDB docID = fileParts[1] IndexError: list index out of range

SteffenBrinckmann commented 3 months ago

@HTsybenko When you test it in the next beta-release, can you send me the output in the terminal. It should not produce the IndexError and I created a safeguard for it. But I would like to know the offending file, and that should be printed.

HTsybenko commented 3 months ago

@SteffenBrinckmann I guess this is the file you were referring to:

ERROR-Attachment: Cannot process file couchDB_backup_127001_20240316T140124/: does not have 1+2 parts ERROR-Attachment: Cannot process file couchDB_backup_127001_20240316T140124/research/: does not have 1+2 parts ERROR-Attachment: Cannot process file couchDB_backup_127001_20240316T140124/research/_design/: does not have 1+2 parts ERROR-Attachment: Cannot process file couchDB_backup_127001_20240316T140124/research/_design/viewHierarchy: does not have 1+2 parts ERROR-Attachment: Cannot process file couchDB_backup_127001_20240316T140124/research/_design/viewIdentify: does not have 1+2 parts ERROR-Attachment: Cannot process file couchDB_backup_127001_20240316T140124/research/_design/viewDocType: does not have 1+2 parts