Need to update Specialty Genes Data Landing Page with new data sources

PATRIC3 / patric3_website

Legacy PATRIC Website (JBoss Portal Version)

MIT License

5 stars 2 forks source link

Need to update Specialty Genes Data Landing Page with new data sources #1842

Closed rkenyon closed 6 years ago

rkenyon commented 6 years ago

For Antibiotic Resistance description, remove ARDB and add PATRIC AMR curation and NDARO (https://www.ncbi.nlm.nih.gov/pathogens/antimicrobial-resistance/).

Need 2 new categories with descriptions:

Transporters (uses TCDB http://www.tcdb.org/)
Essential genes (uses PATRIC model reconstruction? need link)

hyoo commented 6 years ago

@rkenyon or @mshukla1 would you provide one line description about the data type?

hyoo commented 6 years ago

how does this sound like?

Transporters refer to proteins that serve the function of moving other materials within an organism. We have integrated and mapped proteins from Transporter Classification Database.

Essential genes refer to the genes that are critical for the organism's survival. We have built PATRIC reconstruction model to identify essential genes.

hyoo commented 6 years ago

updated