mshukla1
commented
5 years ago If you are using wgs metagenomics sample and searching it against a 16s database (RDP or SILVA), you are going to get picture like this, because >99% of the reads won't match to anything, and all the matches will have very small values to go with them, i.e. 0.00002% in the example above.
The only way I can can make it readable is by making the circular view smaller and decreasing font size so that they don't overlap.
Given this is TP tool, I don't think we have much control over the layout.
BTW, you know that you can click on any of those smaller wedges and expand to see subclasses, right?
jimdavis1
This is what the taxonomy classification output typically looks like. Note that the bottom right list of constituents is unreadable.
If you drag it out far enough you can start to read it but we have lost so much real estate to the white space at the top, the green bar, and gray bar across the bottom that I need to make it almost the same size as my entire screen. Note the difference in resolution on my machine between the downloaded html (left) and the website version (right). The website version needs to be much larger in order to read it.