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PATRIC3 / patric3_website

Legacy PATRIC Website (JBoss Portal Version)
MIT License
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protein family sorter anomaly #616

Closed olsonanl closed 7 years ago

olsonanl commented 8 years ago

If we select a tax level from the protein family sorter, say Hydrogenthermaceae it shows there are 7 genomes

screen shot 2016-03-08 at 4 19 05 pm

But if we go there, we see there are only 4 genomes

screen shot 2016-03-08 at 4 20 15 pm

We can drill down to a real anomaly in Sulfurihydrogenibium sp. YO3AOP1. It has families

screen shot 2016-03-08 at 4 10 47 pm

and if you try looking at just that in the sorter you get an error that makes it look like it's missing somewhere or something:

screen shot 2016-03-08 at 4 16 12 pm
mshukla1 commented 8 years ago

Out of 65,000 genomes, why would you pick on 7 Hydrogenthermaceae genomes? WHY, BOB, WHY??

mshukla1 commented 8 years ago

Harry, I checked and seeing similar problems with taxon selector. I don't think it is data problem. I think it is time to redesign or retire the taxon selector panel!!

olsonanl commented 8 years ago

It was a problem narrowed down to a specific example from a larger scope problem the user noted at the workshop.